RL221_ARATH
ID RL221_ARATH Reviewed; 127 AA.
AC Q9SRX7;
DT 13-DEC-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 126.
DE RecName: Full=Putative 60S ribosomal protein L22-1;
GN Name=RPL22A; OrderedLocusNames=At1g02830; ORFNames=F22D16.17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL22 family.
CC {ECO:0000305}.
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DR EMBL; AC009525; AAF02883.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE27476.1; -; Genomic_DNA.
DR PIR; E86158; E86158.
DR RefSeq; NP_171782.1; NM_100164.2.
DR AlphaFoldDB; Q9SRX7; -.
DR SMR; Q9SRX7; -.
DR BioGRID; 23338; 141.
DR STRING; 3702.AT1G02830.1; -.
DR PaxDb; Q9SRX7; -.
DR PRIDE; Q9SRX7; -.
DR ProteomicsDB; 226001; -.
DR EnsemblPlants; AT1G02830.1; AT1G02830.1; AT1G02830.
DR GeneID; 838098; -.
DR Gramene; AT1G02830.1; AT1G02830.1; AT1G02830.
DR KEGG; ath:AT1G02830; -.
DR Araport; AT1G02830; -.
DR TAIR; locus:2024715; AT1G02830.
DR eggNOG; KOG3434; Eukaryota.
DR HOGENOM; CLU_105624_0_1_1; -.
DR InParanoid; Q9SRX7; -.
DR OMA; DCTYPVK; -.
DR OrthoDB; 1594080at2759; -.
DR PhylomeDB; Q9SRX7; -.
DR PRO; PR:Q9SRX7; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SRX7; baseline and differential.
DR Genevisible; Q9SRX7; AT.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; HDA:TAIR.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA.
DR GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR Gene3D; 3.30.1360.210; -; 1.
DR InterPro; IPR002671; Ribosomal_L22e.
DR InterPro; IPR038526; Ribosomal_L22e_sf.
DR PANTHER; PTHR10064; PTHR10064; 1.
DR Pfam; PF01776; Ribosomal_L22e; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..127
FT /note="Putative 60S ribosomal protein L22-1"
FT /id="PRO_0000215510"
SQ SEQUENCE 127 AA; 14451 MW; 29915840C8AB2C4F CRC64;
MARVGAKSSG AGAKKKGVSF VIDCSKPVDD TILEIATLEK FLQERIKVRG KAGALGNSVS
ITRYNGKINV NANSNFSKRY LKYLTKKYLK KYNLRDWLRV IASNKDKNVY EVRYFRIDDE
VASYEED