RL22_CAEEL
ID RL22_CAEEL Reviewed; 130 AA.
AC P52819; P85027;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 128.
DE RecName: Full=60S ribosomal protein L22;
GN Name=rpl-22; ORFNames=C27A2.2;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND ALTERNATIVE SPLICING.
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP PROTEIN SEQUENCE OF 2-8; 29-37; 38-48; 55-64 AND 110-115 (ISOFORM A), AND
RP IDENTIFICATION BY MASS SPECTROMETRY.
RA Bienvenut W.V.;
RL Submitted (AUG-2006) to UniProtKB.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=a;
CC IsoId=P52819-1; Sequence=Displayed;
CC Name=b;
CC IsoId=P52819-2; Sequence=VSP_021365, VSP_021366;
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL22 family.
CC {ECO:0000305}.
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DR EMBL; FO080349; CCD63067.1; -; Genomic_DNA.
DR EMBL; FO080349; CCD63068.1; -; Genomic_DNA.
DR PIR; T15648; T15648.
DR RefSeq; NP_494932.1; NM_062531.5. [P52819-1]
DR AlphaFoldDB; P52819; -.
DR SMR; P52819; -.
DR BioGRID; 39224; 86.
DR IntAct; P52819; 1.
DR STRING; 6239.C27A2.2a; -.
DR iPTMnet; P52819; -.
DR EPD; P52819; -.
DR PaxDb; P52819; -.
DR PeptideAtlas; P52819; -.
DR EnsemblMetazoa; C27A2.2a.1; C27A2.2a.1; WBGene00004434. [P52819-1]
DR GeneID; 173873; -.
DR KEGG; cel:CELE_C27A2.2; -.
DR UCSC; C27A2.2a.1; c. elegans. [P52819-1]
DR CTD; 173873; -.
DR WormBase; C27A2.2a; CE04102; WBGene00004434; rpl-22. [P52819-1]
DR eggNOG; KOG3434; Eukaryota.
DR GeneTree; ENSGT00940000169435; -.
DR HOGENOM; CLU_105624_0_1_1; -.
DR InParanoid; P52819; -.
DR OMA; SELCYFQ; -.
DR OrthoDB; 1594080at2759; -.
DR PhylomeDB; P52819; -.
DR Reactome; R-CEL-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-CEL-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR Reactome; R-CEL-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR Reactome; R-CEL-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-CEL-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR Reactome; R-CEL-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-CEL-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:P52819; -.
DR Proteomes; UP000001940; Chromosome II.
DR Bgee; WBGene00004434; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR Gene3D; 3.30.1360.210; -; 1.
DR InterPro; IPR002671; Ribosomal_L22e.
DR InterPro; IPR038526; Ribosomal_L22e_sf.
DR PANTHER; PTHR10064; PTHR10064; 1.
DR Pfam; PF01776; Ribosomal_L22e; 1.
PE 1: Evidence at protein level;
KW Alternative splicing; Direct protein sequencing; Reference proteome;
KW Ribonucleoprotein; Ribosomal protein.
FT INIT_MET 1
FT /note="Removed"
FT CHAIN 2..130
FT /note="60S ribosomal protein L22"
FT /id="PRO_0000215508"
FT VAR_SEQ 42..53
FT /note="EAFLNEKIKVNG -> SIEFPSLSQDQA (in isoform b)"
FT /evidence="ECO:0000305"
FT /id="VSP_021365"
FT VAR_SEQ 54..130
FT /note="Missing (in isoform b)"
FT /evidence="ECO:0000305"
FT /id="VSP_021366"
SQ SEQUENCE 130 AA; 14946 MW; 9E2244161D88759F CRC64;
MVPKPHAKSA KKALRKKKVH LKFNVECKNP VEDGILRIED LEAFLNEKIK VNGKTGHLAA
NNVKVEVAKS KVSVVSEVPF SKRYLKYLTK KYLKRNSLRD WLRVVAVNKN TYEVRYFHIN
DGEDAGSDHE