ID   RL23_MYCS2              Reviewed;         100 AA.
AC   A0QSD3; I7F8J1;
DT   05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT   09-JAN-2007, sequence version 1.
DT   25-MAY-2022, entry version 94.
DE   RecName: Full=50S ribosomal protein L23 {ECO:0000255|HAMAP-Rule:MF_01369};
GN   Name=rplW {ECO:0000255|HAMAP-Rule:MF_01369};
GN   OrderedLocusNames=MSMEG_1438, MSMEI_1402;
OS   Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS   smegmatis).
OC   Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC   Mycolicibacterium.
OX   NCBI_TaxID=246196;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700084 / mc(2)155;
RA   Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C.,
RA   Fraser C.M.;
RL   Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700084 / mc(2)155;
RX   PubMed=17295914; DOI=10.1186/gb-2007-8-2-r20;
RA   Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C.,
RA   Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.;
RT   "Interrupted coding sequences in Mycobacterium smegmatis: authentic
RT   mutations or sequencing errors?";
RL   Genome Biol. 8:R20.1-R20.9(2007).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], IDENTIFICATION BY MASS
RP   SPECTROMETRY [LARGE SCALE ANALYSIS], AND CLEAVAGE OF INITIATOR METHIONINE.
RC   STRAIN=ATCC 700084 / mc(2)155;
RX   PubMed=18955433; DOI=10.1101/gr.081901.108;
RA   Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M.,
RA   Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.;
RT   "Ortho-proteogenomics: multiple proteomes investigation through orthology
RT   and a new MS-based protocol.";
RL   Genome Res. 19:128-135(2009).
CC   -!- FUNCTION: One of the early assembly proteins it binds 23S rRNA. One of
CC       the proteins that surrounds the polypeptide exit tunnel on the outside
CC       of the ribosome. Forms the main docking site for trigger factor binding
CC       to the ribosome. {ECO:0000255|HAMAP-Rule:MF_01369}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. Contacts protein L29, and
CC       trigger factor when it is bound to the ribosome. {ECO:0000255|HAMAP-
CC       Rule:MF_01369}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL23 family.
CC       {ECO:0000255|HAMAP-Rule:MF_01369}.
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DR   EMBL; CP000480; ABK70487.1; -; Genomic_DNA.
DR   EMBL; CP001663; AFP37875.1; -; Genomic_DNA.
DR   RefSeq; WP_003892825.1; NZ_SIJM01000016.1.
DR   RefSeq; YP_885821.1; NC_008596.1.
DR   PDB; 5O60; EM; 3.20 A; U=1-100.
DR   PDB; 5O61; EM; 3.31 A; U=1-100.
DR   PDB; 5XYM; EM; 3.08 A; T=1-100.
DR   PDB; 5ZEB; EM; 3.40 A; U=1-100.
DR   PDB; 5ZEP; EM; 3.40 A; U=1-100.
DR   PDB; 5ZET; EM; 3.20 A; U=1-100.
DR   PDB; 6DZI; EM; 3.46 A; U=2-98.
DR   PDB; 6DZP; EM; 3.42 A; U=2-100.
DR   PDBsum; 5O60; -.
DR   PDBsum; 5O61; -.
DR   PDBsum; 5XYM; -.
DR   PDBsum; 5ZEB; -.
DR   PDBsum; 5ZEP; -.
DR   PDBsum; 5ZET; -.
DR   PDBsum; 6DZI; -.
DR   PDBsum; 6DZP; -.
DR   AlphaFoldDB; A0QSD3; -.
DR   SMR; A0QSD3; -.
DR   IntAct; A0QSD3; 4.
DR   STRING; 246196.MSMEI_1402; -.
DR   PRIDE; A0QSD3; -.
DR   EnsemblBacteria; ABK70487; ABK70487; MSMEG_1438.
DR   EnsemblBacteria; AFP37875; AFP37875; MSMEI_1402.
DR   GeneID; 66732897; -.
DR   KEGG; msg:MSMEI_1402; -.
DR   KEGG; msm:MSMEG_1438; -.
DR   PATRIC; fig|246196.19.peg.1424; -.
DR   eggNOG; COG0089; Bacteria.
DR   OMA; FEVDHRA; -.
DR   OrthoDB; 1978865at2; -.
DR   Proteomes; UP000000757; Chromosome.
DR   Proteomes; UP000006158; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.70.330; -; 1.
DR   HAMAP; MF_01369_B; Ribosomal_L23_B; 1.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR012678; Ribosomal_L23/L15e_core_dom_sf.
DR   InterPro; IPR001014; Ribosomal_L23/L25_CS.
DR   InterPro; IPR013025; Ribosomal_L25/23.
DR   PANTHER; PTHR11620; PTHR11620; 1.
DR   Pfam; PF00276; Ribosomal_L23; 1.
DR   SUPFAM; SSF54189; SSF54189; 1.
DR   PROSITE; PS00050; RIBOSOMAL_L23; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW   RNA-binding; rRNA-binding.
FT   INIT_MET        1
FT                   /note="Removed"
FT                   /evidence="ECO:0000269|PubMed:18955433"
FT   CHAIN           2..100
FT                   /note="50S ribosomal protein L23"
FT                   /id="PRO_1000068113"
FT   HELIX           8..11
FT                   /evidence="ECO:0007829|PDB:5XYM"
FT   HELIX           18..24
FT                   /evidence="ECO:0007829|PDB:5XYM"
FT   TURN            25..27
FT                   /evidence="ECO:0007829|PDB:5XYM"
FT   STRAND          28..31
FT                   /evidence="ECO:0007829|PDB:5XYM"
FT   HELIX           39..50
FT                   /evidence="ECO:0007829|PDB:5XYM"
FT   STRAND          54..57
FT                   /evidence="ECO:0007829|PDB:6DZP"
FT   STRAND          59..62
FT                   /evidence="ECO:0007829|PDB:5XYM"
FT   STRAND          79..85
FT                   /evidence="ECO:0007829|PDB:5XYM"
FT   HELIX           94..96
FT                   /evidence="ECO:0007829|PDB:6DZP"
SQ   SEQUENCE   100 AA;  11028 MW;  7DBEF0FD4D647C20 CRC64;
     MATITDPRDI ILAPVISEKS YGLIEDNVYT FVVHPDSNKT QIKIAIEKIF DVKVDSVNTA
     NRQGKRKRTR TGFGKRKSTK RAIVKLAAGS KPIDLFGAPA