RL23_THEKO
ID RL23_THEKO Reviewed; 86 AA.
AC Q5JDH1;
DT 23-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 25-MAY-2022, entry version 90.
DE RecName: Full=50S ribosomal protein L23 {ECO:0000255|HAMAP-Rule:MF_01369};
GN Name=rpl23 {ECO:0000255|HAMAP-Rule:MF_01369}; OrderedLocusNames=TK1540;
OS Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
OS (Pyrococcus kodakaraensis (strain KOD1)).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Thermococcus.
OX NCBI_TaxID=69014;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-918 / JCM 12380 / KOD1;
RX PubMed=15710748; DOI=10.1101/gr.3003105;
RA Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.;
RT "Complete genome sequence of the hyperthermophilic archaeon Thermococcus
RT kodakaraensis KOD1 and comparison with Pyrococcus genomes.";
RL Genome Res. 15:352-363(2005).
CC -!- FUNCTION: Binds to 23S rRNA. One of the proteins that surrounds the
CC polypeptide exit tunnel on the outside of the ribosome.
CC {ECO:0000255|HAMAP-Rule:MF_01369}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. Contacts protein L29.
CC {ECO:0000255|HAMAP-Rule:MF_01369}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL23 family.
CC {ECO:0000255|HAMAP-Rule:MF_01369}.
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DR EMBL; AP006878; BAD85729.1; -; Genomic_DNA.
DR RefSeq; WP_011250491.1; NC_006624.1.
DR PDB; 6SKF; EM; 2.95 A; BW=1-86.
DR PDB; 6SKG; EM; 2.65 A; BW=1-86.
DR PDB; 6TH6; EM; 2.55 A; BW=1-86.
DR PDBsum; 6SKF; -.
DR PDBsum; 6SKG; -.
DR PDBsum; 6TH6; -.
DR AlphaFoldDB; Q5JDH1; -.
DR SMR; Q5JDH1; -.
DR STRING; 69014.TK1540; -.
DR EnsemblBacteria; BAD85729; BAD85729; TK1540.
DR GeneID; 3235327; -.
DR KEGG; tko:TK1540; -.
DR PATRIC; fig|69014.16.peg.1500; -.
DR eggNOG; arCOG04072; Archaea.
DR HOGENOM; CLU_037562_4_2_2; -.
DR InParanoid; Q5JDH1; -.
DR OMA; MDPYKVI; -.
DR OrthoDB; 113971at2157; -.
DR PhylomeDB; Q5JDH1; -.
DR Proteomes; UP000000536; Chromosome.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0000027; P:ribosomal large subunit assembly; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.70.330; -; 1.
DR HAMAP; MF_01369_A; Ribosomal_L23_A; 1.
DR HAMAP; MF_01369_B; Ribosomal_L23_B; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR019985; Ribosomal_L23.
DR InterPro; IPR012678; Ribosomal_L23/L15e_core_dom_sf.
DR InterPro; IPR001014; Ribosomal_L23/L25_CS.
DR InterPro; IPR013025; Ribosomal_L25/23.
DR PANTHER; PTHR11620; PTHR11620; 1.
DR Pfam; PF00276; Ribosomal_L23; 1.
DR SUPFAM; SSF54189; SSF54189; 1.
DR TIGRFAMs; TIGR03636; uL23_arch; 1.
DR PROSITE; PS00050; RIBOSOMAL_L23; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..86
FT /note="50S ribosomal protein L23"
FT /id="PRO_0000272954"
SQ SEQUENCE 86 AA; 9898 MW; F1A7CB127CCE7B6F CRC64;
MDPYKVIIRP LVTEKAVSLI ERENKLTFIV DRRATKQDIK RAVEEMFNVK VAKVNTLVTM
KGEKKAYVKL KPEYDASEIA ARLGLF