ID   RL25_RHOPA              Reviewed;         230 AA.
AC   Q6N1P8;
DT   21-JUN-2005, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 3.
DT   03-AUG-2022, entry version 101.
DE   RecName: Full=50S ribosomal protein L25;
DE   AltName: Full=General stress protein CTC;
DE   AltName: Full=RRP-L25;
GN   Name=rplY; Synonyms=ctc; OrderedLocusNames=RPA4356;
OS   Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC   Bradyrhizobiaceae; Rhodopseudomonas.
OX   NCBI_TaxID=258594;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-98 / CGA009;
RX   PubMed=14704707; DOI=10.1038/nbt923;
RA   Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L.,
RA   Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R.,
RA   Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C.,
RA   Harrison F.H., Gibson J., Harwood C.S.;
RT   "Complete genome sequence of the metabolically versatile photosynthetic
RT   bacterium Rhodopseudomonas palustris.";
RL   Nat. Biotechnol. 22:55-61(2004).
RN   [2]
RP   PROTEIN SEQUENCE OF 194-228.
RC   STRAIN=ATCC BAA-98 / CGA009;
RX   PubMed=15473684; DOI=10.1021/pr049940z;
RA   Strader M.B., VerBerkmoes N.C., Tabb D.L., Connelly H.M., Barton J.W.,
RA   Bruce B.D., Pelletier D.A., Davison B.H., Hettich R.L., Larimer F.W.,
RA   Hurst G.B.;
RT   "Characterization of the 70S ribosome from Rhodopseudomonas palustris using
RT   an integrated 'top-down' and 'bottom-up' mass spectrometric approach.";
RL   J. Proteome Res. 3:965-978(2004).
CC   -!- FUNCTION: This is one of the proteins that binds to the 5S RNA in the
CC       ribosome where it forms part of the central protuberance.
CC       {ECO:0000250}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC       rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA
CC       independently of L5 and L18 (By similarity). {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL25 family. CTC
CC       subfamily. {ECO:0000305}.
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DR   EMBL; BX572607; CAE29797.1; -; Genomic_DNA.
DR   RefSeq; WP_011159890.1; NC_005296.1.
DR   AlphaFoldDB; Q6N1P8; -.
DR   SMR; Q6N1P8; -.
DR   IntAct; Q6N1P8; 1.
DR   STRING; 258594.RPA4356; -.
DR   PRIDE; Q6N1P8; -.
DR   EnsemblBacteria; CAE29797; CAE29797; RPA4356.
DR   GeneID; 66895489; -.
DR   KEGG; rpa:RPA4356; -.
DR   eggNOG; COG1825; Bacteria.
DR   HOGENOM; CLU_075939_0_0_5; -.
DR   OMA; HVDFYEV; -.
DR   PhylomeDB; Q6N1P8; -.
DR   BioCyc; RPAL258594:TX73_RS22215-MON; -.
DR   Proteomes; UP000001426; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0008097; F:5S rRNA binding; IEA:InterPro.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00495; Ribosomal_L25_TL5_CTC; 1.
DR   Gene3D; 2.170.120.20; -; 1.
DR   Gene3D; 2.40.240.10; -; 1.
DR   HAMAP; MF_01334; Ribosomal_L25_CTC; 1.
DR   InterPro; IPR020056; Rbsml_L25/Gln-tRNA_synth_N.
DR   InterPro; IPR029751; Ribosomal_L25.
DR   InterPro; IPR011035; Ribosomal_L25/Gln-tRNA_synth.
DR   InterPro; IPR020057; Ribosomal_L25_b-dom.
DR   InterPro; IPR037121; Ribosomal_L25_C.
DR   InterPro; IPR001021; Ribosomal_L25_long.
DR   Pfam; PF01386; Ribosomal_L25p; 1.
DR   Pfam; PF14693; Ribosomal_TL5_C; 1.
DR   SUPFAM; SSF50715; SSF50715; 1.
DR   TIGRFAMs; TIGR00731; bL25_bact_ctc; 1.
PE   1: Evidence at protein level;
KW   Direct protein sequencing; Reference proteome; Ribonucleoprotein;
KW   Ribosomal protein; RNA-binding; rRNA-binding.
FT   INIT_MET        1
FT                   /note="Removed"
FT   CHAIN           2..230
FT                   /note="50S ribosomal protein L25"
FT                   /id="PRO_0000181590"
SQ   SEQUENCE   230 AA;  23970 MW;  C36A58498F567F30 CRC64;
     MTSVLELKAT ARPKSGKGAA RAERRAGRVP GVIYGDNQSP LPISVEEKEL RLRILAGRFL
     TTVFDVVLDG KKHRVIPRDY HLDPVRDFPI HVDFLRLGAG ATIRVSVPLH LKGLEVAPGV
     KRGGTFNIVT HTVELEAPAE NIPQFIEADV STLDIGVSLH LSDIALPTGV KSVSRDDVTL
     VTIVPPSGYN EDKAAAGAAP AAAAAPAAAA KAPAAAAKAP AAAAPAAKKK