ID   RL25_VIBVU              Reviewed;          92 AA.
AC   Q8D8W6;
DT   21-JUN-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2003, sequence version 1.
DT   25-MAY-2022, entry version 104.
DE   RecName: Full=50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01336};
GN   Name=rplY {ECO:0000255|HAMAP-Rule:MF_01336}; OrderedLocusNames=VV1_2850;
OS   Vibrio vulnificus (strain CMCP6).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
OX   NCBI_TaxID=216895;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CMCP6;
RA   Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.;
RT   "Complete genome sequence of Vibrio vulnificus CMCP6.";
RL   Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: This is one of the proteins that binds to the 5S RNA in the
CC       ribosome where it forms part of the central protuberance.
CC       {ECO:0000255|HAMAP-Rule:MF_01336}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC       rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA
CC       independently of L5 and L18. {ECO:0000255|HAMAP-Rule:MF_01336}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL25 family.
CC       {ECO:0000255|HAMAP-Rule:MF_01336}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AE016795; AAO11186.1; -; Genomic_DNA.
DR   RefSeq; WP_011080674.1; NC_004459.3.
DR   PDB; 5IZN; X-ray; 2.35 A; A/B/C/D/E/F/G/H=1-92.
DR   PDBsum; 5IZN; -.
DR   AlphaFoldDB; Q8D8W6; -.
DR   SMR; Q8D8W6; -.
DR   EnsemblBacteria; AAO11186; AAO11186; VV1_2850.
DR   KEGG; vvu:VV1_2850; -.
DR   HOGENOM; CLU_137946_0_0_6; -.
DR   OMA; HAGKFPA; -.
DR   Proteomes; UP000002275; Chromosome 1.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0008097; F:5S rRNA binding; IEA:InterPro.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00495; Ribosomal_L25_TL5_CTC; 1.
DR   Gene3D; 2.40.240.10; -; 1.
DR   HAMAP; MF_01336; Ribosomal_L25; 1.
DR   InterPro; IPR020056; Rbsml_L25/Gln-tRNA_synth_N.
DR   InterPro; IPR029751; Ribosomal_L25.
DR   InterPro; IPR011035; Ribosomal_L25/Gln-tRNA_synth.
DR   InterPro; IPR020055; Ribosomal_L25_short.
DR   Pfam; PF01386; Ribosomal_L25p; 1.
DR   SUPFAM; SSF50715; SSF50715; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW   rRNA-binding.
FT   CHAIN           1..92
FT                   /note="50S ribosomal protein L25"
FT                   /id="PRO_0000181501"
FT   STRAND          2..7
FT                   /evidence="ECO:0007829|PDB:5IZN"
FT   HELIX           15..20
FT                   /evidence="ECO:0007829|PDB:5IZN"
FT   TURN            21..23
FT                   /evidence="ECO:0007829|PDB:5IZN"
FT   STRAND          24..30
FT                   /evidence="ECO:0007829|PDB:5IZN"
FT   STRAND          37..42
FT                   /evidence="ECO:0007829|PDB:5IZN"
FT   HELIX           43..47
FT                   /evidence="ECO:0007829|PDB:5IZN"
FT   TURN            48..51
FT                   /evidence="ECO:0007829|PDB:5IZN"
FT   HELIX           53..56
FT                   /evidence="ECO:0007829|PDB:5IZN"
FT   STRAND          59..63
FT                   /evidence="ECO:0007829|PDB:5IZN"
FT   STRAND          66..78
FT                   /evidence="ECO:0007829|PDB:5IZN"
FT   STRAND          87..91
FT                   /evidence="ECO:0007829|PDB:5IZN"
SQ   SEQUENCE   92 AA;  10275 MW;  FC5FA4F82C9698FC CRC64;
     MKFEAVVRTE LGKGASRRLR LAGQFPAVVY GGEAAPVAVA LNHDDIVNQM DKPEFYEAIT
     LVIGGEEVKV KPQDVQRHAF KPKVEHMDFI RI