RL25_YERPN
ID RL25_YERPN Reviewed; 94 AA.
AC Q1CG40; C4GW74;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2006, sequence version 1.
DT 25-MAY-2022, entry version 80.
DE RecName: Full=50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01336};
GN Name=rplY {ECO:0000255|HAMAP-Rule:MF_01336}; OrderedLocusNames=YPN_2712;
GN ORFNames=YP516_3064;
OS Yersinia pestis bv. Antiqua (strain Nepal516).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=377628;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nepal516;
RX PubMed=16740952; DOI=10.1128/jb.00124-06;
RA Chain P.S.G., Hu P., Malfatti S.A., Radnedge L., Larimer F., Vergez L.M.,
RA Worsham P., Chu M.C., Andersen G.L.;
RT "Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516:
RT evidence of gene reduction in an emerging pathogen.";
RL J. Bacteriol. 188:4453-4463(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nepal516;
RA Plunkett G. III, Anderson B.D., Baumler D.J., Burland V., Cabot E.L.,
RA Glasner J.D., Mau B., Neeno-Eckwall E., Perna N.T., Munk A.C., Tapia R.,
RA Green L.D., Rogers Y.C., Detter J.C., Bruce D.C., Brettin T.S.;
RT "Yersinia pestis Nepal516A whole genome shotgun sequencing project.";
RL Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: This is one of the proteins that binds to the 5S RNA in the
CC ribosome where it forms part of the central protuberance.
CC {ECO:0000255|HAMAP-Rule:MF_01336}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA
CC independently of L5 and L18. {ECO:0000255|HAMAP-Rule:MF_01336}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL25 family.
CC {ECO:0000255|HAMAP-Rule:MF_01336}.
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DR EMBL; CP000305; ABG19040.1; -; Genomic_DNA.
DR EMBL; ACNQ01000017; EEO75174.1; -; Genomic_DNA.
DR RefSeq; WP_002208834.1; NZ_ACNQ01000017.1.
DR AlphaFoldDB; Q1CG40; -.
DR SMR; Q1CG40; -.
DR EnsemblBacteria; ABG19040; ABG19040; YPN_2712.
DR GeneID; 66842266; -.
DR KEGG; ypn:YPN_2712; -.
DR HOGENOM; CLU_137946_0_0_6; -.
DR OMA; HAGKFPA; -.
DR Proteomes; UP000008936; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0008097; F:5S rRNA binding; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00495; Ribosomal_L25_TL5_CTC; 1.
DR Gene3D; 2.40.240.10; -; 1.
DR HAMAP; MF_01336; Ribosomal_L25; 1.
DR InterPro; IPR020056; Rbsml_L25/Gln-tRNA_synth_N.
DR InterPro; IPR029751; Ribosomal_L25.
DR InterPro; IPR011035; Ribosomal_L25/Gln-tRNA_synth.
DR InterPro; IPR020055; Ribosomal_L25_short.
DR Pfam; PF01386; Ribosomal_L25p; 1.
DR SUPFAM; SSF50715; SSF50715; 1.
PE 3: Inferred from homology;
KW Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1..94
FT /note="50S ribosomal protein L25"
FT /id="PRO_1000052975"
SQ SEQUENCE 94 AA; 10406 MW; BC68C59A804BFBAF CRC64;
MTTINVEVRN DQGKGASRRL RAANKFPAIV YGGSEAAISI ALDHDTTKNL ELKPGFYDSV
LTLVIDGKET KVKVQAVQRH AFKPKLTHID FVRV