RL271_ARATH
ID RL271_ARATH Reviewed; 135 AA.
AC Q9SKX8;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=60S ribosomal protein L27-1;
GN Name=RPL27A; OrderedLocusNames=At2g32220; ORFNames=F22D22.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Cheuk R.F., Kim C.J., Ecker J.R.;
RT "Arabidopsis cDNA clones.";
RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL27 family.
CC {ECO:0000305}.
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DR EMBL; AC006223; AAD15383.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC08651.1; -; Genomic_DNA.
DR EMBL; BT021972; AAY17409.1; -; mRNA.
DR PIR; D84730; D84730.
DR RefSeq; NP_180781.1; NM_128781.3.
DR AlphaFoldDB; Q9SKX8; -.
DR SMR; Q9SKX8; -.
DR BioGRID; 3128; 182.
DR STRING; 3702.AT2G32220.1; -.
DR PaxDb; Q9SKX8; -.
DR PRIDE; Q9SKX8; -.
DR ProteomicsDB; 226887; -.
DR EnsemblPlants; AT2G32220.1; AT2G32220.1; AT2G32220.
DR GeneID; 817781; -.
DR Gramene; AT2G32220.1; AT2G32220.1; AT2G32220.
DR KEGG; ath:AT2G32220; -.
DR Araport; AT2G32220; -.
DR TAIR; locus:2045467; AT2G32220.
DR eggNOG; KOG3418; Eukaryota.
DR HOGENOM; CLU_067359_0_1_1; -.
DR InParanoid; Q9SKX8; -.
DR OMA; KHKTQQE; -.
DR OrthoDB; 1584965at2759; -.
DR PhylomeDB; Q9SKX8; -.
DR PRO; PR:Q9SKX8; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SKX8; baseline and differential.
DR Genevisible; Q9SKX8; AT.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; HDA:TAIR.
DR GO; GO:0005783; C:endoplasmic reticulum; HDA:TAIR.
DR GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd06090; KOW_RPL27; 1.
DR Gene3D; 2.30.30.770; -; 1.
DR InterPro; IPR041991; KOW_RPL27.
DR InterPro; IPR038655; L27e_sf.
DR InterPro; IPR001141; Ribosomal_L27e.
DR InterPro; IPR018262; Ribosomal_L27e_CS.
DR InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR PANTHER; PTHR10497; PTHR10497; 1.
DR Pfam; PF01777; Ribosomal_L27e; 1.
DR SUPFAM; SSF50104; SSF50104; 1.
DR PROSITE; PS01107; RIBOSOMAL_L27E; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..135
FT /note="60S ribosomal protein L27-1"
FT /id="PRO_0000244740"
SQ SEQUENCE 135 AA; 15470 MW; DFB393B57E5F0826 CRC64;
MVKCMKPGKA VILLQGRYTG KKAVIVKSFD DGTVEKKYGH CLVAGLKKYP SKVIRKDSAK
KTAKKSRVKC FFKVINYQHV MPTRYTLDLD LKNVVSADAI SSKDKKVTAL KEAKAKFEER
FKTGKNRWFF TKLRF