RL272_ARATH
ID RL272_ARATH Reviewed; 135 AA.
AC Q8LCL3; Q9LIE0;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 27-JUN-2006, sequence version 2.
DT 25-MAY-2022, entry version 111.
DE RecName: Full=60S ribosomal protein L27-2;
GN Name=RPL27B; OrderedLocusNames=At3g22230; ORFNames=MKA23.13;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL27 family.
CC {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AP001306; BAB03070.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76607.1; -; Genomic_DNA.
DR EMBL; AY062617; AAL32695.1; -; mRNA.
DR EMBL; AY063860; AAL36216.1; -; mRNA.
DR EMBL; AY091218; AAM14157.1; -; mRNA.
DR EMBL; AY093389; AAM13388.1; -; mRNA.
DR EMBL; AY136321; AAM96987.1; -; mRNA.
DR EMBL; BT000418; AAN15737.1; -; mRNA.
DR EMBL; AY086536; AAM63601.1; -; mRNA.
DR RefSeq; NP_188862.1; NM_113120.3.
DR AlphaFoldDB; Q8LCL3; -.
DR SMR; Q8LCL3; -.
DR BioGRID; 7119; 183.
DR STRING; 3702.AT3G22230.1; -.
DR iPTMnet; Q8LCL3; -.
DR PaxDb; Q8LCL3; -.
DR PRIDE; Q8LCL3; -.
DR ProteomicsDB; 226903; -.
DR EnsemblPlants; AT3G22230.1; AT3G22230.1; AT3G22230.
DR GeneID; 821787; -.
DR Gramene; AT3G22230.1; AT3G22230.1; AT3G22230.
DR KEGG; ath:AT3G22230; -.
DR Araport; AT3G22230; -.
DR TAIR; locus:2090434; AT3G22230.
DR eggNOG; KOG3418; Eukaryota.
DR HOGENOM; CLU_067359_0_1_1; -.
DR InParanoid; Q8LCL3; -.
DR OMA; CKAPREA; -.
DR OrthoDB; 1584965at2759; -.
DR PhylomeDB; Q8LCL3; -.
DR PRO; PR:Q8LCL3; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q8LCL3; baseline and differential.
DR Genevisible; Q8LCL3; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; HDA:TAIR.
DR GO; GO:0022626; C:cytosolic ribosome; HDA:TAIR.
DR GO; GO:0042788; C:polysomal ribosome; IDA:CAFA.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd06090; KOW_RPL27; 1.
DR Gene3D; 2.30.30.770; -; 1.
DR InterPro; IPR041991; KOW_RPL27.
DR InterPro; IPR038655; L27e_sf.
DR InterPro; IPR001141; Ribosomal_L27e.
DR InterPro; IPR018262; Ribosomal_L27e_CS.
DR InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR PANTHER; PTHR10497; PTHR10497; 1.
DR Pfam; PF01777; Ribosomal_L27e; 1.
DR SUPFAM; SSF50104; SSF50104; 1.
DR PROSITE; PS01107; RIBOSOMAL_L27E; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..135
FT /note="60S ribosomal protein L27-2"
FT /id="PRO_0000244741"
FT CONFLICT 108
FT /note="T -> I (in Ref. 4; AAM63601)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 135 AA; 15615 MW; 2806DF3A632C22E1 CRC64;
MVKFLKQNKA VILLQGRYAG KKAVIIKSFD DGTSDRRYGH CLVAGLKKYP SKVIRKDSAK
KTAKKSRVKC FIKLVNYQHL MPTRYTLDVD LKEVATLDAL KSKDKKVTAL KEAKAKLEER
FKTGKNRWFF TKLRF