RL28_DEIRA
ID RL28_DEIRA Reviewed; 81 AA.
AC Q9RRG8;
DT 01-JUN-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 111.
DE RecName: Full=50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373};
GN Name=rpmB {ECO:0000255|HAMAP-Rule:MF_00373}; OrderedLocusNames=DR_2524;
OS Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG
OS 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422).
OC Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae;
OC Deinococcus.
OX NCBI_TaxID=243230;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
RC 9279 / R1 / VKM B-1422;
RX PubMed=10567266; DOI=10.1126/science.286.5444.1571;
RA White O., Eisen J.A., Heidelberg J.F., Hickey E.K., Peterson J.D.,
RA Dodson R.J., Haft D.H., Gwinn M.L., Nelson W.C., Richardson D.L.,
RA Moffat K.S., Qin H., Jiang L., Pamphile W., Crosby M., Shen M.,
RA Vamathevan J.J., Lam P., McDonald L.A., Utterback T.R., Zalewski C.,
RA Makarova K.S., Aravind L., Daly M.J., Minton K.W., Fleischmann R.D.,
RA Ketchum K.A., Nelson K.E., Salzberg S.L., Smith H.O., Venter J.C.,
RA Fraser C.M.;
RT "Genome sequence of the radioresistant bacterium Deinococcus radiodurans
RT R1.";
RL Science 286:1571-1577(1999).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL28 family.
CC {ECO:0000255|HAMAP-Rule:MF_00373}.
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DR EMBL; AE000513; AAF12065.1; -; Genomic_DNA.
DR PIR; C75262; C75262.
DR RefSeq; NP_296244.1; NC_001263.1.
DR RefSeq; WP_010889149.1; NZ_CP015081.1.
DR PDB; 2ZJP; X-ray; 3.70 A; U=1-81.
DR PDB; 2ZJQ; X-ray; 3.30 A; U=1-81.
DR PDB; 2ZJR; X-ray; 2.91 A; U=1-81.
DR PDB; 3CF5; X-ray; 3.30 A; U=1-81.
DR PDB; 3DLL; X-ray; 3.50 A; U=1-81.
DR PDB; 3PIO; X-ray; 3.25 A; U=1-81.
DR PDB; 3PIP; X-ray; 3.45 A; U=1-81.
DR PDB; 4IO9; X-ray; 3.20 A; U=1-81.
DR PDB; 4IOA; X-ray; 3.20 A; U=1-81.
DR PDB; 4IOC; X-ray; 3.60 A; U=1-81.
DR PDB; 4U67; X-ray; 3.65 A; U=1-81.
DR PDB; 4WFN; X-ray; 3.54 A; U=1-81.
DR PDB; 5DM6; X-ray; 2.90 A; U=8-79.
DR PDB; 5DM7; X-ray; 3.00 A; U=8-79.
DR PDB; 5JVG; X-ray; 3.43 A; U=1-81.
DR PDB; 5JVH; X-ray; 3.58 A; U=1-81.
DR PDB; 7A0R; X-ray; 3.30 A; U=6-79.
DR PDB; 7A0S; X-ray; 3.22 A; U=6-79.
DR PDB; 7A18; X-ray; 3.40 A; U=6-79.
DR PDBsum; 2ZJP; -.
DR PDBsum; 2ZJQ; -.
DR PDBsum; 2ZJR; -.
DR PDBsum; 3CF5; -.
DR PDBsum; 3DLL; -.
DR PDBsum; 3PIO; -.
DR PDBsum; 3PIP; -.
DR PDBsum; 4IO9; -.
DR PDBsum; 4IOA; -.
DR PDBsum; 4IOC; -.
DR PDBsum; 4U67; -.
DR PDBsum; 4WFN; -.
DR PDBsum; 5DM6; -.
DR PDBsum; 5DM7; -.
DR PDBsum; 5JVG; -.
DR PDBsum; 5JVH; -.
DR PDBsum; 7A0R; -.
DR PDBsum; 7A0S; -.
DR PDBsum; 7A18; -.
DR AlphaFoldDB; Q9RRG8; -.
DR SMR; Q9RRG8; -.
DR IntAct; Q9RRG8; 1.
DR STRING; 243230.DR_2524; -.
DR EnsemblBacteria; AAF12065; AAF12065; DR_2524.
DR KEGG; dra:DR_2524; -.
DR PATRIC; fig|243230.17.peg.2766; -.
DR eggNOG; COG0227; Bacteria.
DR HOGENOM; CLU_064548_6_0_0; -.
DR OMA; RECYLTG; -.
DR OrthoDB; 2062238at2; -.
DR EvolutionaryTrace; Q9RRG8; -.
DR Proteomes; UP000002524; Chromosome I.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 2.30.170.40; -; 1.
DR HAMAP; MF_00373; Ribosomal_L28; 1.
DR InterPro; IPR034704; L28p-like.
DR InterPro; IPR026569; Ribo_L28/L24.
DR InterPro; IPR037147; Ribo_L28/L24_sf.
DR InterPro; IPR001383; Ribosomal_L28.
DR Pfam; PF00830; Ribosomal_L28; 1.
DR SUPFAM; SSF143800; SSF143800; 1.
DR TIGRFAMs; TIGR00009; L28; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..81
FT /note="50S ribosomal protein L28"
FT /id="PRO_0000178465"
FT STRAND 10..12
FT /evidence="ECO:0007829|PDB:5DM6"
FT STRAND 18..20
FT /evidence="ECO:0007829|PDB:7A0S"
FT STRAND 23..25
FT /evidence="ECO:0007829|PDB:2ZJR"
FT STRAND 28..33
FT /evidence="ECO:0007829|PDB:5DM6"
FT STRAND 36..38
FT /evidence="ECO:0007829|PDB:4IO9"
FT STRAND 41..43
FT /evidence="ECO:0007829|PDB:7A0S"
FT STRAND 54..56
FT /evidence="ECO:0007829|PDB:5DM6"
FT HELIX 64..72
FT /evidence="ECO:0007829|PDB:5DM6"
FT STRAND 75..77
FT /evidence="ECO:0007829|PDB:5DM6"
SQ SEQUENCE 81 AA; 8963 MW; B0CAAA1ED0FD24B2 CRC64;
MSRECYLTGK KNLVVNSVIR RGKARADGGV GRKTTGITKR VQRANLHKKA IRENGQVKTV
WLSANALRTL SKGPYKGIEL I
