RL302_ARATH
ID RL302_ARATH Reviewed; 112 AA.
AC Q8VZ19; Q9SH07;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 25-MAY-2022, entry version 122.
DE RecName: Full=60S ribosomal protein L30-2;
GN Name=RPL30B; OrderedLocusNames=At1g77940; ORFNames=F28K19.15;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL30 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF17698.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC009243; AAF17698.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE36049.1; -; Genomic_DNA.
DR EMBL; AY065370; AAL38811.1; -; mRNA.
DR EMBL; AY114036; AAM45084.1; -; mRNA.
DR EMBL; BT004749; AAO44015.1; -; mRNA.
DR EMBL; AY085881; AAM63094.1; -; mRNA.
DR RefSeq; NP_565164.1; NM_106443.5.
DR AlphaFoldDB; Q8VZ19; -.
DR SMR; Q8VZ19; -.
DR BioGRID; 29348; 78.
DR STRING; 3702.AT1G77940.1; -.
DR PaxDb; Q8VZ19; -.
DR PRIDE; Q8VZ19; -.
DR ProteomicsDB; 226026; -.
DR EnsemblPlants; AT1G77940.1; AT1G77940.1; AT1G77940.
DR GeneID; 844129; -.
DR Gramene; AT1G77940.1; AT1G77940.1; AT1G77940.
DR KEGG; ath:AT1G77940; -.
DR Araport; AT1G77940; -.
DR TAIR; locus:2029401; AT1G77940.
DR eggNOG; KOG2988; Eukaryota.
DR HOGENOM; CLU_130502_0_1_1; -.
DR InParanoid; Q8VZ19; -.
DR OMA; MIANNCP; -.
DR OrthoDB; 1503991at2759; -.
DR PhylomeDB; Q8VZ19; -.
DR PRO; PR:Q8VZ19; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q8VZ19; baseline and differential.
DR Genevisible; Q8VZ19; AT.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; HDA:TAIR.
DR GO; GO:0022626; C:cytosolic ribosome; HDA:TAIR.
DR GO; GO:0005739; C:mitochondrion; HDA:TAIR.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA.
DR Gene3D; 3.30.1330.30; -; 1.
DR InterPro; IPR039109; L30/L30e/YlxQ.
DR InterPro; IPR029064; L30e-like.
DR InterPro; IPR022991; Ribosomal_L30e_CS.
DR InterPro; IPR004038; Ribosomal_L7Ae/L30e/S12e/Gad45.
DR PANTHER; PTHR11449; PTHR11449; 1.
DR Pfam; PF01248; Ribosomal_L7Ae; 1.
DR SUPFAM; SSF55315; SSF55315; 1.
DR PROSITE; PS00709; RIBOSOMAL_L30E_1; 1.
DR PROSITE; PS00993; RIBOSOMAL_L30E_2; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..112
FT /note="60S ribosomal protein L30-2"
FT /id="PRO_0000244748"
SQ SEQUENCE 112 AA; 12290 MW; 46B1BB752A5D034B CRC64;
MVTEKKTKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRG SKGKLILIST NCPPLRRSEI
EYYAMLAKVG VHHYNGNNVD LGTACGKYFR VSCLSIVDPG DSDIIKSIPG DQ
