RL30_AGRFC
ID RL30_AGRFC Reviewed; 68 AA.
AC P68995; Q8U570;
DT 01-FEB-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 1.
DT 25-MAY-2022, entry version 87.
DE RecName: Full=50S ribosomal protein L30 {ECO:0000255|HAMAP-Rule:MF_01371};
GN Name=rpmD {ECO:0000255|HAMAP-Rule:MF_01371}; OrderedLocusNames=Atu1928.1;
GN ORFNames=AGR_C_3526;
OS Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens
OS (strain C58)).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
OC Agrobacterium tumefaciens complex.
OX NCBI_TaxID=176299;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C58 / ATCC 33970;
RX PubMed=11743193; DOI=10.1126/science.1066804;
RA Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K.,
RA Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y.,
RA Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P.,
RA Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R.,
RA Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G.,
RA Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y.,
RA Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S.,
RA Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F.,
RA Gordon M.P., Olson M.V., Nester E.W.;
RT "The genome of the natural genetic engineer Agrobacterium tumefaciens
RT C58.";
RL Science 294:2317-2323(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C58 / ATCC 33970;
RX PubMed=11743194; DOI=10.1126/science.1066803;
RA Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B.,
RA Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K.,
RA Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M.,
RA Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C.,
RA Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
RT "Genome sequence of the plant pathogen and biotechnology agent
RT Agrobacterium tumefaciens C58.";
RL Science 294:2323-2328(2001).
RN [3]
RP IDENTIFICATION.
RX PubMed=15374867; DOI=10.1093/bioinformatics/bti027;
RA Mikkelsen T.S., Galagan J.E., Mesirov J.P.;
RT "Improving genome annotations using phylogenetic profile anomaly
RT detection.";
RL Bioinformatics 21:464-470(2005).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01371}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL30 family.
CC {ECO:0000255|HAMAP-Rule:MF_01371}.
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DR EMBL; AE007869; AAK87691.2; -; Genomic_DNA.
DR RefSeq; NP_354906.2; NC_003062.2.
DR RefSeq; WP_003495212.1; NC_003062.2.
DR AlphaFoldDB; P68995; -.
DR SMR; P68995; -.
DR STRING; 176299.Atu8065; -.
DR EnsemblBacteria; AAK87691; AAK87691; Atu8065.
DR GeneID; 66222142; -.
DR KEGG; atu:Atu8065; -.
DR PATRIC; fig|176299.10.peg.1940; -.
DR eggNOG; COG1841; Bacteria.
DR HOGENOM; CLU_131047_1_2_5; -.
DR OMA; GKQNQRD; -.
DR PhylomeDB; P68995; -.
DR PRO; PR:P68995; -.
DR Proteomes; UP000000813; Chromosome circular.
DR GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd01658; Ribosomal_L30; 1.
DR Gene3D; 3.30.1390.20; -; 1.
DR HAMAP; MF_01371_B; Ribosomal_L30_B; 1.
DR InterPro; IPR036919; L30_ferredoxin-like_sf.
DR InterPro; IPR005996; Ribosomal_L30_bac-type.
DR InterPro; IPR016082; Ribosomal_L30_ferredoxin-like.
DR PANTHER; PTHR15892; PTHR15892; 1.
DR Pfam; PF00327; Ribosomal_L30; 1.
DR PIRSF; PIRSF002211; Ribosomal_L30_bac-type; 1.
DR SUPFAM; SSF55129; SSF55129; 1.
DR TIGRFAMs; TIGR01308; rpmD_bact; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..68
FT /note="50S ribosomal protein L30"
FT /id="PRO_0000104579"
SQ SEQUENCE 68 AA; 7687 MW; 9024831962BFD611 CRC64;
MAKKTTEAKK TVTVEQIGSP IRRPAIQRQT LVGLGLNKMH RQRTLEDTPA VRGMIRAVQH
LVRVVDEK