RL30_RHOPA
ID RL30_RHOPA Reviewed; 64 AA.
AC Q6N4V1;
DT 21-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=50S ribosomal protein L30 {ECO:0000255|HAMAP-Rule:MF_01371};
DE AltName: Full=RRP-L30;
GN Name=rpmD {ECO:0000255|HAMAP-Rule:MF_01371}; OrderedLocusNames=RPA3232;
OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bradyrhizobiaceae; Rhodopseudomonas.
OX NCBI_TaxID=258594;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-98 / CGA009;
RX PubMed=14704707; DOI=10.1038/nbt923;
RA Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L.,
RA Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R.,
RA Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C.,
RA Harrison F.H., Gibson J., Harwood C.S.;
RT "Complete genome sequence of the metabolically versatile photosynthetic
RT bacterium Rhodopseudomonas palustris.";
RL Nat. Biotechnol. 22:55-61(2004).
RN [2]
RP PROTEIN SEQUENCE OF 2-18, POST-TRANSLATIONAL MODIFICATION, AND MASS
RP SPECTROMETRY.
RC STRAIN=ATCC BAA-98 / CGA009;
RX PubMed=15473684; DOI=10.1021/pr049940z;
RA Strader M.B., VerBerkmoes N.C., Tabb D.L., Connelly H.M., Barton J.W.,
RA Bruce B.D., Pelletier D.A., Davison B.H., Hettich R.L., Larimer F.W.,
RA Hurst G.B.;
RT "Characterization of the 70S ribosome from Rhodopseudomonas palustris using
RT an integrated 'top-down' and 'bottom-up' mass spectrometric approach.";
RL J. Proteome Res. 3:965-978(2004).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit.
CC -!- PTM: The protein is methylated on either Ala-2 or Lys-3.
CC -!- MASS SPECTROMETRY: Mass=7093.0; Method=Electrospray;
CC Evidence={ECO:0000269|PubMed:15473684};
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL30 family.
CC {ECO:0000255|HAMAP-Rule:MF_01371}.
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DR EMBL; BX572603; CAE28673.1; -; Genomic_DNA.
DR RefSeq; WP_011158777.1; NC_005296.1.
DR AlphaFoldDB; Q6N4V1; -.
DR SMR; Q6N4V1; -.
DR IntAct; Q6N4V1; 1.
DR STRING; 258594.RPA3232; -.
DR PRIDE; Q6N4V1; -.
DR EnsemblBacteria; CAE28673; CAE28673; RPA3232.
DR GeneID; 66894318; -.
DR KEGG; rpa:RPA3232; -.
DR eggNOG; COG1841; Bacteria.
DR HOGENOM; CLU_131047_1_2_5; -.
DR OMA; KQTGSPI; -.
DR PhylomeDB; Q6N4V1; -.
DR BioCyc; RPAL258594:TX73_RS16490-MON; -.
DR Proteomes; UP000001426; Chromosome.
DR GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd01658; Ribosomal_L30; 1.
DR Gene3D; 3.30.1390.20; -; 1.
DR HAMAP; MF_01371_B; Ribosomal_L30_B; 1.
DR InterPro; IPR036919; L30_ferredoxin-like_sf.
DR InterPro; IPR005996; Ribosomal_L30_bac-type.
DR InterPro; IPR016082; Ribosomal_L30_ferredoxin-like.
DR Pfam; PF00327; Ribosomal_L30; 1.
DR PIRSF; PIRSF002211; Ribosomal_L30_bac-type; 1.
DR SUPFAM; SSF55129; SSF55129; 1.
DR TIGRFAMs; TIGR01308; rpmD_bact; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Methylation; Reference proteome;
KW Ribonucleoprotein; Ribosomal protein.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000269|PubMed:15473684"
FT CHAIN 2..64
FT /note="50S ribosomal protein L30"
FT /id="PRO_0000224161"
SQ SEQUENCE 64 AA; 7225 MW; D03B0877463F73CC CRC64;
MAKAANMIKV EQIGSPIRRH HSQRETLIGL KLNKIGRVAE LQDTPEVRGM IGKVQHLVRV
VDEK