RL32_ARATH
ID RL32_ARATH Reviewed; 390 AA.
AC P22738; Q9SY92;
DT 01-AUG-1991, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 4.
DT 03-AUG-2022, entry version 154.
DE RecName: Full=60S ribosomal protein L3-2;
GN Name=ARP2; Synonyms=RPL3B; OrderedLocusNames=At1g61580; ORFNames=T25B24.7;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2227432; DOI=10.1016/0378-1119(90)90222-d;
RA Kim Y., Zhang H., Scholl R.L.;
RT "Two evolutionarily divergent genes encode a cytoplasmic ribosomal protein
RT of Arabidopsis thaliana.";
RL Gene 93:177-182(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- SUBCELLULAR LOCATION: Cytoplasm.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL3 family.
CC {ECO:0000305}.
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DR EMBL; M32655; AAA66161.1; -; Genomic_DNA.
DR EMBL; AC005850; AAD25547.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE33859.1; -; Genomic_DNA.
DR EMBL; BT003869; AAO41918.1; -; mRNA.
DR EMBL; BT005702; AAO64122.1; -; mRNA.
DR PIR; B96641; B96641.
DR PIR; JQ0772; JQ0772.
DR RefSeq; NP_176352.1; NM_104840.5.
DR AlphaFoldDB; P22738; -.
DR SMR; P22738; -.
DR BioGRID; 27677; 170.
DR IntAct; P22738; 1.
DR STRING; 3702.AT1G61580.1; -.
DR iPTMnet; P22738; -.
DR PaxDb; P22738; -.
DR PRIDE; P22738; -.
DR ProteomicsDB; 236463; -.
DR EnsemblPlants; AT1G61580.1; AT1G61580.1; AT1G61580.
DR GeneID; 842454; -.
DR Gramene; AT1G61580.1; AT1G61580.1; AT1G61580.
DR KEGG; ath:AT1G61580; -.
DR Araport; AT1G61580; -.
DR TAIR; locus:2200873; AT1G61580.
DR eggNOG; KOG0746; Eukaryota.
DR HOGENOM; CLU_033361_2_1_1; -.
DR InParanoid; P22738; -.
DR OMA; QMKKYCS; -.
DR OrthoDB; 793191at2759; -.
DR PhylomeDB; P22738; -.
DR PRO; PR:P22738; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; P22738; baseline and differential.
DR Genevisible; P22738; AT.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; HDA:TAIR.
DR GO; GO:0005634; C:nucleus; HDA:TAIR.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR Gene3D; 4.10.960.10; -; 1.
DR InterPro; IPR045077; L3_arc_euk.
DR InterPro; IPR000597; Ribosomal_L3.
DR InterPro; IPR019926; Ribosomal_L3_CS.
DR InterPro; IPR044892; Ribosomal_L3_dom_3_arc_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR11363; PTHR11363; 1.
DR Pfam; PF00297; Ribosomal_L3; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
DR PROSITE; PS00474; RIBOSOMAL_L3; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..390
FT /note="60S ribosomal protein L3-2"
FT /id="PRO_0000077240"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 174
FT /note="L -> V (in Ref. 1; AAA66161)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 390 AA; 44546 MW; 1D9B17C2A953B27C CRC64;
MSHRKFEHPR HGSLGFLPRK RASRHRGKVK AFPKDDPTKP CRLTSFLGYK AGMTHIVRDV
EKPGSKLHKK ETCEAVTIIE TPPMVVVGVV GYVKTPRGLR SLCTVWAQHL SEELRRRFYK
NWAKSKKKAF TRYSKKHETE EGKKDIQSQL EKMKKYCSVI RVLAHTQIRK MKGLKQKKAH
LNEIQINGGD IAKKVDYACS LFEKQVPVDA IFQKDEMIDI IGVTKGKGYE GVVTRWGVTR
LPRKTHRGLR KVACIGAWHP ARVSYTVARA GQNGYHHRTE MNKKVYRVGK VGQETHSAMT
EYDRTEKDIT PMGGFPHYGI VKEDYLMIKG CCVGPKKRVV TLRQTLLKQT SRLAMEEIKL
KFIDAASNGG HGRFQTSQEK AKFYGRTIKA
