RL34_BACSU
ID RL34_BACSU Reviewed; 44 AA.
AC P05647;
DT 01-NOV-1988, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1988, sequence version 1.
DT 03-AUG-2022, entry version 129.
DE RecName: Full=50S ribosomal protein L34;
GN Name=rpmH; OrderedLocusNames=BSU41060;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2987847; DOI=10.1093/nar/13.7.2251;
RA Moriya S., Ogasawara N., Yoshikawa H.;
RT "Structure and function of the region of the replication origin of the
RT Bacillus subtilis chromosome. III. Nucleotide sequence of some 10,000 base
RT pairs in the origin region.";
RL Nucleic Acids Res. 13:2251-2265(1985).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168 / CRK2000;
RX PubMed=1552862; DOI=10.1111/j.1365-2958.1992.tb01510.x;
RA Ogasawara N., Yoshikawa H.;
RT "Genes and their organization in the replication origin region of the
RT bacterial chromosome.";
RL Mol. Microbiol. 6:629-634(1992).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168;
RX PubMed=7584024; DOI=10.1093/dnares/1.1.1;
RA Ogasawara N., Nakai S., Yoshikawa H.;
RT "Systematic sequencing of the 180 kilobase region of the Bacillus subtilis
RT chromosome containing the replication origin.";
RL DNA Res. 1:1-14(1994).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [5] {ECO:0007744|PDB:6HA1, ECO:0007744|PDB:6HA8}
RP STRUCTURE BY ELECTRON MICROSCOPY (3.10 ANGSTROMS) OF 1-44 WITH AND WITHOUT
RP VIRGINIAMYCIN M, AND SUBUNIT.
RX PubMed=30126986; DOI=10.1073/pnas.1808535115;
RA Crowe-McAuliffe C., Graf M., Huter P., Takada H., Abdelshahid M.,
RA Novacek J., Murina V., Atkinson G.C., Hauryliuk V., Wilson D.N.;
RT "Structural basis for antibiotic resistance mediated by the Bacillus
RT subtilis ABCF ATPase VmlR.";
RL Proc. Natl. Acad. Sci. U.S.A. 115:8978-8983(2018).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit.
CC {ECO:0000269|PubMed:30126986}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL34 family.
CC {ECO:0000305}.
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DR EMBL; X02369; CAA26216.1; -; Genomic_DNA.
DR EMBL; X62539; CAA44399.1; -; Genomic_DNA.
DR EMBL; D26185; BAA05236.1; -; Genomic_DNA.
DR EMBL; AL009126; CAB16143.1; -; Genomic_DNA.
DR PIR; I40435; R6BS34.
DR RefSeq; NP_391986.1; NC_000964.3.
DR RefSeq; WP_003178075.1; NZ_JNCM01000034.1.
DR PDB; 3J3V; EM; 13.30 A; 2=1-44.
DR PDB; 3J3W; EM; 10.70 A; 2=1-44.
DR PDB; 3J9W; EM; 3.90 A; B6=1-44.
DR PDB; 5NJT; EM; 3.80 A; r=1-44.
DR PDB; 6HA1; EM; 3.10 A; 2=1-44.
DR PDB; 6HA8; EM; 3.50 A; 2=1-44.
DR PDB; 6HTQ; EM; 4.50 A; 3=1-44.
DR PDB; 6PPF; EM; 3.40 A; d=1-44.
DR PDB; 6PPK; EM; 4.40 A; d=1-44.
DR PDB; 6PVK; EM; 3.40 A; d=1-44.
DR PDB; 6TNN; EM; 3.07 A; r=1-44.
DR PDB; 6TPQ; EM; 3.07 A; r=1-44.
DR PDB; 7AQC; EM; 2.99 A; d=1-44.
DR PDB; 7AQD; EM; 3.10 A; d=1-44.
DR PDB; 7AS8; EM; 2.90 A; h=1-44.
DR PDB; 7AS9; EM; 3.50 A; h=1-44.
DR PDB; 7O5B; EM; 3.33 A; 2=1-44.
DR PDB; 7OPE; EM; 3.20 A; h=1-44.
DR PDB; 7QV1; EM; 3.50 A; 2=1-44.
DR PDB; 7QV2; EM; 3.50 A; 2=1-44.
DR PDB; 7QV3; EM; 5.14 A; 2=1-44.
DR PDBsum; 3J3V; -.
DR PDBsum; 3J3W; -.
DR PDBsum; 3J9W; -.
DR PDBsum; 5NJT; -.
DR PDBsum; 6HA1; -.
DR PDBsum; 6HA8; -.
DR PDBsum; 6HTQ; -.
DR PDBsum; 6PPF; -.
DR PDBsum; 6PPK; -.
DR PDBsum; 6PVK; -.
DR PDBsum; 6TNN; -.
DR PDBsum; 6TPQ; -.
DR PDBsum; 7AQC; -.
DR PDBsum; 7AQD; -.
DR PDBsum; 7AS8; -.
DR PDBsum; 7AS9; -.
DR PDBsum; 7O5B; -.
DR PDBsum; 7OPE; -.
DR PDBsum; 7QV1; -.
DR PDBsum; 7QV2; -.
DR PDBsum; 7QV3; -.
DR AlphaFoldDB; P05647; -.
DR SMR; P05647; -.
DR IntAct; P05647; 1.
DR STRING; 224308.BSU41060; -.
DR PaxDb; P05647; -.
DR PRIDE; P05647; -.
DR EnsemblBacteria; CAB16143; CAB16143; BSU_41060.
DR GeneID; 56669680; -.
DR GeneID; 64305893; -.
DR GeneID; 66328015; -.
DR GeneID; 937942; -.
DR KEGG; bsu:BSU41060; -.
DR PATRIC; fig|224308.179.peg.4448; -.
DR eggNOG; COG0230; Bacteria.
DR InParanoid; P05647; -.
DR PhylomeDB; P05647; -.
DR BioCyc; BSUB:BSU41060-MON; -.
DR PRO; PR:P05647; -.
DR Proteomes; UP000001570; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00391; Ribosomal_L34; 1.
DR InterPro; IPR000271; Ribosomal_L34.
DR InterPro; IPR020939; Ribosomal_L34_CS.
DR PANTHER; PTHR14503; PTHR14503; 1.
DR Pfam; PF00468; Ribosomal_L34; 1.
DR TIGRFAMs; TIGR01030; rpmH_bact; 1.
DR PROSITE; PS00784; RIBOSOMAL_L34; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..44
FT /note="50S ribosomal protein L34"
FT /id="PRO_0000187341"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..21
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT HELIX 9..15
FT /evidence="ECO:0007829|PDB:7AS8"
FT HELIX 18..23
FT /evidence="ECO:0007829|PDB:7AS8"
FT HELIX 25..36
FT /evidence="ECO:0007829|PDB:7AS8"
SQ SEQUENCE 44 AA; 5253 MW; 1D475891875995AA CRC64;
MKRTFQPNNR KRSKVHGFRS RMSSKNGRLV LARRRRKGRK VLSA