RL37_THEKO
ID RL37_THEKO Reviewed; 63 AA.
AC Q5JIE1;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=50S ribosomal protein L37e {ECO:0000255|HAMAP-Rule:MF_00547};
GN Name=rpl37e {ECO:0000255|HAMAP-Rule:MF_00547}; OrderedLocusNames=TK0975;
OS Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
OS (Pyrococcus kodakaraensis (strain KOD1)).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Thermococcus.
OX NCBI_TaxID=69014;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-918 / JCM 12380 / KOD1;
RX PubMed=15710748; DOI=10.1101/gr.3003105;
RA Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.;
RT "Complete genome sequence of the hyperthermophilic archaeon Thermococcus
RT kodakaraensis KOD1 and comparison with Pyrococcus genomes.";
RL Genome Res. 15:352-363(2005).
CC -!- FUNCTION: Binds to the 23S rRNA. {ECO:0000255|HAMAP-Rule:MF_00547}.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00547};
CC Note=Binds 1 zinc ion per subunit. {ECO:0000255|HAMAP-Rule:MF_00547};
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL37 family.
CC {ECO:0000255|HAMAP-Rule:MF_00547}.
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DR EMBL; AP006878; BAD85164.1; -; Genomic_DNA.
DR RefSeq; WP_011249926.1; NC_006624.1.
DR PDB; 6SKF; EM; 2.95 A; Bh=1-63.
DR PDB; 6SKG; EM; 2.65 A; Bh=1-63.
DR PDB; 6TH6; EM; 2.55 A; Bh=1-63.
DR PDBsum; 6SKF; -.
DR PDBsum; 6SKG; -.
DR PDBsum; 6TH6; -.
DR AlphaFoldDB; Q5JIE1; -.
DR SMR; Q5JIE1; -.
DR STRING; 69014.TK0975; -.
DR EnsemblBacteria; BAD85164; BAD85164; TK0975.
DR GeneID; 3235342; -.
DR KEGG; tko:TK0975; -.
DR PATRIC; fig|69014.16.peg.953; -.
DR eggNOG; arCOG04126; Archaea.
DR HOGENOM; CLU_208825_0_0_2; -.
DR InParanoid; Q5JIE1; -.
DR OMA; RIRRYSW; -.
DR OrthoDB; 124429at2157; -.
DR PhylomeDB; Q5JIE1; -.
DR Proteomes; UP000000536; Chromosome.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 2.20.25.30; -; 1.
DR HAMAP; MF_00547; Ribosomal_L37e; 1.
DR InterPro; IPR011331; Ribosomal_L37ae/L37e.
DR InterPro; IPR001569; Ribosomal_L37e.
DR InterPro; IPR018267; Ribosomal_L37e_CS.
DR InterPro; IPR011332; Ribosomal_zn-bd.
DR Pfam; PF01907; Ribosomal_L37e; 1.
DR SUPFAM; SSF57829; SSF57829; 1.
DR PROSITE; PS01077; RIBOSOMAL_L37E; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Metal-binding; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding; Zinc; Zinc-finger.
FT CHAIN 1..63
FT /note="50S ribosomal protein L37e"
FT /id="PRO_0000139737"
FT ZN_FING 20..38
FT /note="C4-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00547"
FT BINDING 20
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00547"
FT BINDING 23
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00547"
FT BINDING 35
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00547"
FT BINDING 38
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00547"
SQ SEQUENCE 63 AA; 7448 MW; 52E86E31D4DCC3E3 CRC64;
MGAGTAPKGK RNRTPTHIRC RRCGRRAFNV KKGYCAACGF GRSRRMRKYS WSHKWRKKRN
LSY
