RL38A_SCHPO
ID RL38A_SCHPO Reviewed; 74 AA.
AC Q9USR7; O13288;
DT 20-JUN-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 120.
DE RecName: Full=60S ribosomal protein L38-1;
GN Name=rpl3801; Synonyms=rpl38a; ORFNames=SPBC577.02;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 10-74.
RA Kawamukai M.;
RT "S.pombe ribosomal protein L38 homolog.";
RL Submitted (AUG-1997) to the EMBL/GenBank/DDBJ databases.
CC -!- MISCELLANEOUS: There are two genes for L38 in S.pombe.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL38 family.
CC {ECO:0000305}.
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DR EMBL; CU329671; CAB54810.1; -; Genomic_DNA.
DR EMBL; AB006199; BAA21766.1; -; mRNA.
DR PIR; T40546; T40546.
DR PIR; T43273; T43273.
DR RefSeq; NP_595300.1; NM_001021207.2.
DR AlphaFoldDB; Q9USR7; -.
DR SMR; Q9USR7; -.
DR BioGRID; 277426; 44.
DR IntAct; Q9USR7; 2.
DR MINT; Q9USR7; -.
DR STRING; 4896.SPBC577.02.1; -.
DR iPTMnet; Q9USR7; -.
DR MaxQB; Q9USR7; -.
DR PaxDb; Q9USR7; -.
DR PRIDE; Q9USR7; -.
DR EnsemblFungi; SPBC577.02.1; SPBC577.02.1:pep; SPBC577.02.
DR GeneID; 2540910; -.
DR KEGG; spo:SPBC577.02; -.
DR PomBase; SPBC577.02; rpl3801.
DR VEuPathDB; FungiDB:SPBC577.02; -.
DR eggNOG; KOG3499; Eukaryota.
DR HOGENOM; CLU_152057_1_0_1; -.
DR InParanoid; Q9USR7; -.
DR OMA; RCHRHLY; -.
DR PhylomeDB; Q9USR7; -.
DR Reactome; R-SPO-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-SPO-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR Reactome; R-SPO-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-SPO-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR Reactome; R-SPO-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-SPO-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:Q9USR7; -.
DR Proteomes; UP000002485; Chromosome II.
DR GO; GO:0005829; C:cytosol; HDA:PomBase.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; ISO:PomBase.
DR GO; GO:0003735; F:structural constituent of ribosome; ISO:PomBase.
DR GO; GO:0002181; P:cytoplasmic translation; ISO:PomBase.
DR GO; GO:0022618; P:ribonucleoprotein complex assembly; IBA:GO_Central.
DR Gene3D; 3.30.720.90; -; 1.
DR InterPro; IPR002675; Ribosomal_L38e.
DR InterPro; IPR038464; Ribosomal_L38e_sf.
DR PANTHER; PTHR10965; PTHR10965; 1.
DR Pfam; PF01781; Ribosomal_L38e; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..74
FT /note="60S ribosomal protein L38-1"
FT /id="PRO_0000215443"
FT CONFLICT 10
FT /note="Q -> E (in Ref. 2; BAA21766)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 74 AA; 8492 MW; A69CA5DFF3A39913 CRC64;
MPRQISDIKQ FLEIARRKDA TSARIKKNTN KDVKFKLRCS KYLYTLVVAD AKKAEKLRQS
LPPDLTVTEV GKKA