RL39_BOVIN
ID RL39_BOVIN Reviewed; 51 AA.
AC Q3T051; A8E4Q2;
DT 13-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=60S ribosomal protein L39;
GN Name=RPL39;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Hereford; TISSUE=Testis, and Thymus;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: RNA-binding component of the large ribosomal subunit. The
CC ribosome is a large ribonucleoprotein complex responsible for the
CC synthesis of proteins in the cell. {ECO:0000250|UniProtKB:P62891}.
CC -!- SUBUNIT: Component of the large ribosomal subunit (By similarity).
CC Interacts with IMPACT (By similarity). {ECO:0000250|UniProtKB:P62891,
CC ECO:0000250|UniProtKB:P62892}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P62891}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL39 family.
CC {ECO:0000305}.
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DR EMBL; BC102562; AAI02563.1; -; mRNA.
DR EMBL; BC151476; AAI51477.1; -; mRNA.
DR RefSeq; NP_001098925.1; NM_001105455.1.
DR RefSeq; XP_010798833.1; XM_010800531.2.
DR RefSeq; XP_010810324.1; XM_010812022.2.
DR RefSeq; XP_010820323.1; XM_010822021.2.
DR RefSeq; XP_010820978.1; XM_010822676.2.
DR AlphaFoldDB; Q3T051; -.
DR SMR; Q3T051; -.
DR STRING; 9913.ENSBTAP00000046223; -.
DR PaxDb; Q3T051; -.
DR PRIDE; Q3T051; -.
DR Ensembl; ENSBTAT00000049315; ENSBTAP00000046223; ENSBTAG00000034844.
DR Ensembl; ENSBTAT00000062986; ENSBTAP00000055278; ENSBTAG00000054736.
DR Ensembl; ENSBTAT00000064702; ENSBTAP00000054413; ENSBTAG00000047136.
DR Ensembl; ENSBTAT00000083996; ENSBTAP00000070654; ENSBTAG00000049441.
DR Ensembl; ENSBTAT00000086638; ENSBTAP00000062104; ENSBTAG00000049833.
DR Ensembl; ENSBTAT00000087168; ENSBTAP00000063036; ENSBTAG00000054083.
DR GeneID; 101902490; -.
DR GeneID; 101907518; -.
DR GeneID; 767908; -.
DR KEGG; bta:101902490; -.
DR KEGG; bta:101907518; -.
DR KEGG; bta:767908; -.
DR CTD; 6170; -.
DR VEuPathDB; HostDB:ENSBTAG00000034844; -.
DR VEuPathDB; HostDB:ENSBTAG00000047136; -.
DR VEuPathDB; HostDB:ENSBTAG00000049441; -.
DR VEuPathDB; HostDB:ENSBTAG00000049833; -.
DR VEuPathDB; HostDB:ENSBTAG00000054083; -.
DR VEuPathDB; HostDB:ENSBTAG00000054736; -.
DR eggNOG; KOG0002; Eukaryota.
DR GeneTree; ENSGT00390000014814; -.
DR HOGENOM; CLU_181948_3_0_1; -.
DR InParanoid; Q3T051; -.
DR OMA; MKRRHWR; -.
DR OrthoDB; 1618745at2759; -.
DR TreeFam; TF300223; -.
DR Reactome; R-BTA-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-BTA-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR Reactome; R-BTA-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-BTA-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-BTA-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR Proteomes; UP000009136; Chromosome 10.
DR Proteomes; UP000009136; Chromosome 14.
DR Proteomes; UP000009136; Chromosome 15.
DR Proteomes; UP000009136; Chromosome 6.
DR Proteomes; UP000009136; Chromosome X.
DR Bgee; ENSBTAG00000034844; Expressed in retropharyngeal lymph node and 48 other tissues.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005615; C:extracellular space; IEA:Ensembl.
DR GO; GO:0042788; C:polysomal ribosome; IEA:Ensembl.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:Ensembl.
DR GO; GO:0019731; P:antibacterial humoral response; IEA:Ensembl.
DR GO; GO:0061844; P:antimicrobial humoral immune response mediated by antimicrobial peptide; IEA:Ensembl.
DR GO; GO:0002181; P:cytoplasmic translation; IEA:Ensembl.
DR GO; GO:0050830; P:defense response to Gram-positive bacterium; IEA:Ensembl.
DR GO; GO:0002227; P:innate immune response in mucosa; IEA:Ensembl.
DR Gene3D; 1.10.1620.10; -; 1.
DR HAMAP; MF_00629; Ribosomal_L39e; 1.
DR InterPro; IPR000077; Ribosomal_L39.
DR InterPro; IPR020083; Ribosomal_L39_CS.
DR InterPro; IPR023626; Ribosomal_L39e_dom_sf.
DR Pfam; PF00832; Ribosomal_L39; 1.
DR SUPFAM; SSF48662; SSF48662; 1.
DR PROSITE; PS00051; RIBOSOMAL_L39E; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..51
FT /note="60S ribosomal protein L39"
FT /id="PRO_0000240154"
SQ SEQUENCE 51 AA; 6407 MW; 2023CA8590C7752C CRC64;
MSSHKTFRIK RFLAKKQKQN RPIPQWIRMK TGNKIRYNSK RRHWRRTKLG L
