RL39_CAEEL
ID RL39_CAEEL Reviewed; 51 AA.
AC P52814;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 134.
DE RecName: Full=60S ribosomal protein L39;
GN Name=rpl-39; ORFNames=C26F1.9;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Bristol N2;
RA Kohara Y., Shin-i T., Suzuki Y., Sugano S., Potdevin M., Thierry-Mieg Y.,
RA Thierry-Mieg D., Thierry-Mieg J.;
RT "The Caenorhabditis elegans transcriptome project, a complementary view of
RT the genome.";
RL Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Interacts with impact. {ECO:0000250|UniProtKB:P62892}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL39 family.
CC {ECO:0000305}.
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DR EMBL; FO080683; CCD65773.1; -; Genomic_DNA.
DR EMBL; AF303271; AAG50229.1; -; mRNA.
DR PIR; T15641; T15641.
DR RefSeq; NP_505006.1; NM_072605.4.
DR AlphaFoldDB; P52814; -.
DR SMR; P52814; -.
DR BioGRID; 44196; 77.
DR STRING; 6239.C26F1.9; -.
DR EPD; P52814; -.
DR PaxDb; P52814; -.
DR PeptideAtlas; P52814; -.
DR EnsemblMetazoa; C26F1.9.1; C26F1.9.1; WBGene00004453.
DR GeneID; 179153; -.
DR UCSC; C26F1.9.1; c. elegans.
DR CTD; 179153; -.
DR WormBase; C26F1.9; CE06883; WBGene00004453; rpl-39.
DR eggNOG; KOG0002; Eukaryota.
DR GeneTree; ENSGT01050000247372; -.
DR HOGENOM; CLU_181948_3_0_1; -.
DR InParanoid; P52814; -.
DR OMA; MKRRHWR; -.
DR OrthoDB; 1618745at2759; -.
DR PhylomeDB; P52814; -.
DR Reactome; R-CEL-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-CEL-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR Reactome; R-CEL-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR Reactome; R-CEL-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-CEL-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR Reactome; R-CEL-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-CEL-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:P52814; -.
DR Proteomes; UP000001940; Chromosome V.
DR Bgee; WBGene00004453; Expressed in larva and 3 other tissues.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 1.10.1620.10; -; 1.
DR HAMAP; MF_00629; Ribosomal_L39e; 1.
DR InterPro; IPR000077; Ribosomal_L39.
DR InterPro; IPR020083; Ribosomal_L39_CS.
DR InterPro; IPR023626; Ribosomal_L39e_dom_sf.
DR Pfam; PF00832; Ribosomal_L39; 1.
DR SUPFAM; SSF48662; SSF48662; 1.
DR PROSITE; PS00051; RIBOSOMAL_L39E; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..51
FT /note="60S ribosomal protein L39"
FT /id="PRO_0000127030"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 51 AA; 6328 MW; D576919A22011D8F CRC64;
MSALKKSFIK RKLAKKQKQN RPMPQWVRMK TGNTMKYNAK RRHWRRTKLK L
