RL3_ORYSJ
ID RL3_ORYSJ Reviewed; 389 AA.
AC P35684; Q2QX68;
DT 01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 2.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=60S ribosomal protein L3;
GN Name=RPL3; OrderedLocusNames=Os12g0167900, LOC_Os12g07010;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=8218398; DOI=10.1016/0167-4781(93)90043-d;
RA Nishi R., Kidou S., Uchimiya H., Kato A.;
RT "The primary structure of two proteins from the large ribosomal subunit of
RT rice.";
RL Biochim. Biophys. Acta 1216:110-112(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- FUNCTION: The L3 protein is a component of the large subunit of
CC cytoplasmic ribosomes.
CC -!- SUBCELLULAR LOCATION: Cytoplasm.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL3 family.
CC {ECO:0000305}.
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DR EMBL; D12630; BAA02155.1; -; mRNA.
DR EMBL; DP000011; ABA95909.1; -; Genomic_DNA.
DR EMBL; AP008218; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AP014968; BAT16042.1; -; Genomic_DNA.
DR PIR; S38359; S38359.
DR RefSeq; XP_015619855.1; XM_015764369.1.
DR AlphaFoldDB; P35684; -.
DR SMR; P35684; -.
DR STRING; 4530.OS12T0167900-01; -.
DR PaxDb; P35684; -.
DR PRIDE; P35684; -.
DR EnsemblPlants; Os12t0167900-01; Os12t0167900-01; Os12g0167900.
DR GeneID; 4351604; -.
DR Gramene; Os12t0167900-01; Os12t0167900-01; Os12g0167900.
DR KEGG; osa:4351604; -.
DR eggNOG; KOG0746; Eukaryota.
DR HOGENOM; CLU_033361_2_1_1; -.
DR InParanoid; P35684; -.
DR OMA; QMKKYCS; -.
DR OrthoDB; 334613at2759; -.
DR Proteomes; UP000000763; Chromosome 12.
DR Proteomes; UP000059680; Chromosome 12.
DR ExpressionAtlas; P35684; baseline and differential.
DR Genevisible; P35684; OS.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR Gene3D; 4.10.960.10; -; 1.
DR InterPro; IPR045077; L3_arc_euk.
DR InterPro; IPR000597; Ribosomal_L3.
DR InterPro; IPR019926; Ribosomal_L3_CS.
DR InterPro; IPR044892; Ribosomal_L3_dom_3_arc_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR11363; PTHR11363; 1.
DR Pfam; PF00297; Ribosomal_L3; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
DR PROSITE; PS00474; RIBOSOMAL_L3; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250"
FT CHAIN 2..389
FT /note="60S ribosomal protein L3"
FT /id="PRO_0000077241"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 389 AA; 44464 MW; E6F537556ADA3D15 CRC64;
MSHRKFEHPR HGSLGFLPRK RSSRHRGKVK SFPKDDVSKP CHLTSFVGYK AGMTHIVREV
EKPGSKLHKK ETCEAVTIIE TPPLVIVGLV AYVKTPRGLR SLNSVWAQHL SEEVRRRFYK
NWCKSKKKAF TKYALKYDSD AGKKEIQMQL EKMKKYASIV RVIAHTQIRK MKGLKQKKAH
LMEIQINGGT IADKVDYGYK FFEKEIPVDA VFQKDEMIDI IGVTKGKGYE GVVTRWGVTR
LPRKTHRGLR KVACIGAWHP ARVSYTVARA GQNGYHHRTE MNKKVYKIGK SGQESHAACT
EFDRTEKDIT PMGGFPHYGV VKGDYLMIKG CCVGPKKRVV TLRQSLLKQT SRLALEEIKL
KFIDTSSKFG HGRFQTTDEK QRFFGKLKA