RL3_PIG
ID RL3_PIG Reviewed; 403 AA.
AC Q29293; A0A4X1VV59;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 29-SEP-2021, sequence version 2.
DT 03-AUG-2022, entry version 89.
DE RecName: Full=60S ribosomal protein L3;
GN Name=RPL3;
OS Sus scrofa (Pig).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
OX NCBI_TaxID=9823;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG Porcine genome sequencing project;
RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 205-333.
RC TISSUE=Small intestine;
RX PubMed=8672129; DOI=10.1007/s003359900153;
RA Winteroe A.K., Fredholm M., Davies W.;
RT "Evaluation and characterization of a porcine small intestine cDNA library:
RT analysis of 839 clones.";
RL Mamm. Genome 7:509-517(1996).
CC -!- FUNCTION: Component of the large ribosomal subunit. The ribosome is a
CC large ribonucleoprotein complex responsible for the synthesis of
CC proteins in the cell. {ECO:0000250|UniProtKB:P39023}.
CC -!- SUBUNIT: Component of the large ribosomal subunit. Interacts with
CC DHX33. {ECO:0000250|UniProtKB:P39023}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000250|UniProtKB:P39023}. Cytoplasm
CC {ECO:0000250|UniProtKB:P39023}.
CC -!- PTM: Constitutively monomethylated at His-245 by METTL18. Regulates the
CC function of RPL3 in the dynamics of pre-rRNA processing, ribosome
CC biogenesis, and translation. It is not required for incorporation of
CC RPL3 into ribosomes. {ECO:0000250|UniProtKB:P39023}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL3 family.
CC {ECO:0000305}.
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DR EMBL; JH115620; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; F14648; CAA23176.1; -; mRNA.
DR RefSeq; NP_001230992.1; NM_001244063.1.
DR SMR; Q29293; -.
DR STRING; 9823.ENSSSCP00000000093; -.
DR PaxDb; Q29293; -.
DR PeptideAtlas; Q29293; -.
DR PRIDE; Q29293; -.
DR Ensembl; ENSSSCT00000063010; ENSSSCP00000051888; ENSSSCG00000040494.
DR Ensembl; ENSSSCT00005015313; ENSSSCP00005009129; ENSSSCG00005009880.
DR Ensembl; ENSSSCT00015045382; ENSSSCP00015017992; ENSSSCG00015033990.
DR Ensembl; ENSSSCT00025007807; ENSSSCP00025003152; ENSSSCG00025005840.
DR Ensembl; ENSSSCT00030006628; ENSSSCP00030002919; ENSSSCG00030004909.
DR Ensembl; ENSSSCT00035040465; ENSSSCP00035016175; ENSSSCG00035030560.
DR Ensembl; ENSSSCT00040070609; ENSSSCP00040030079; ENSSSCG00040052167.
DR Ensembl; ENSSSCT00045053070; ENSSSCP00045036916; ENSSSCG00045031022.
DR Ensembl; ENSSSCT00050104983; ENSSSCP00050046113; ENSSSCG00050076426.
DR Ensembl; ENSSSCT00055023445; ENSSSCP00055018534; ENSSSCG00055011918.
DR Ensembl; ENSSSCT00060062901; ENSSSCP00060026976; ENSSSCG00060046322.
DR Ensembl; ENSSSCT00060062923; ENSSSCP00060026982; ENSSSCG00060046322.
DR Ensembl; ENSSSCT00065023278; ENSSSCP00065009474; ENSSSCG00065017514.
DR Ensembl; ENSSSCT00070053710; ENSSSCP00070045533; ENSSSCG00070026776.
DR GeneID; 396768; -.
DR KEGG; ssc:396768; -.
DR CTD; 6122; -.
DR VGNC; VGNC:92427; RPL3.
DR eggNOG; KOG0746; Eukaryota.
DR GeneTree; ENSGT00390000017606; -.
DR InParanoid; Q29293; -.
DR OMA; HQRTEYN; -.
DR Proteomes; UP000008227; Chromosome 5.
DR Proteomes; UP000314985; Chromosome 5.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; ISS:UniProtKB.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0071353; P:cellular response to interleukin-4; IEA:Ensembl.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR Gene3D; 4.10.960.10; -; 1.
DR InterPro; IPR045077; L3_arc_euk.
DR InterPro; IPR000597; Ribosomal_L3.
DR InterPro; IPR019926; Ribosomal_L3_CS.
DR InterPro; IPR044892; Ribosomal_L3_dom_3_arc_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR11363; PTHR11363; 1.
DR Pfam; PF00297; Ribosomal_L3; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
DR PROSITE; PS00474; RIBOSOMAL_L3; 1.
PE 2: Evidence at transcript level;
KW Acetylation; Cytoplasm; Isopeptide bond; Methylation; Nucleus;
KW Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW Ubl conjugation.
FT CHAIN 1..403
FT /note="60S ribosomal protein L3"
FT /id="PRO_0000077230"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 13
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT MOD_RES 136
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000250|UniProtKB:P27659"
FT MOD_RES 245
FT /note="Tele-methylhistidine"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT MOD_RES 286
FT /note="N6-acetyllysine; alternate"
FT /evidence="ECO:0000250|UniProtKB:P27659"
FT MOD_RES 294
FT /note="N6-acetyllysine; alternate"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT MOD_RES 304
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT MOD_RES 366
FT /note="N6-acetyllysine; alternate"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT MOD_RES 373
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000250|UniProtKB:P27659"
FT CROSSLNK 39
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT CROSSLNK 224
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT CROSSLNK 226
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT CROSSLNK 286
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2); alternate"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT CROSSLNK 294
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO1); alternate"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT CROSSLNK 366
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2); alternate"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT CROSSLNK 386
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT CROSSLNK 393
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT CROSSLNK 399
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:P39023"
FT CONFLICT 319
FT /note="G -> R (in Ref. 2; CAA23176)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 403 AA; 46123 MW; BD607F14077A5948 CRC64;
MSHRKFSAPR HGSLGFLPRK RSSRHRGKVK SFPKDDSSKP VHLTAFLGYK AGMTHIVREV
DRPGSKVNKK EVVEAVTIVE TPPMVIVGIV GYVETPRGLR TFKTIFAEHI SDECKRRFYK
NWHKSKKKAF TKYCKKWQDE DGKKQLERDF SSMKKYCQVI RVIAHTQMRL LPLRQKKAHL
MEIQVNGGTV AEKLDWARER LEQQVPVNQV FGQDEMIDVI GVTKGKGYKG VTSRWHTKKL
PRKTHRGLRK VACIGAWHPA RVAFSVARAG QKGYHHRTEI NKKIYKIGQG YLIKDGKLIK
NNASTDYDLS DKSINPLGGF VHYGEVTNDF VMLKGCVVGT KKRVLTLRKS LLVQTKRRAL
EKIDLKFIDT TSKFGHGRFQ TVEEKKAFMG PLKKDRIAKE EGA
