RL3_THEKO
ID RL3_THEKO Reviewed; 346 AA.
AC Q5JDJ0;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325};
GN Name=rpl3 {ECO:0000255|HAMAP-Rule:MF_01325}; OrderedLocusNames=TK1542;
OS Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
OS (Pyrococcus kodakaraensis (strain KOD1)).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Thermococcus.
OX NCBI_TaxID=69014;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-918 / JCM 12380 / KOD1;
RX PubMed=15710748; DOI=10.1101/gr.3003105;
RA Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.;
RT "Complete genome sequence of the hyperthermophilic archaeon Thermococcus
RT kodakaraensis KOD1 and comparison with Pyrococcus genomes.";
RL Genome Res. 15:352-363(2005).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S
CC subunit. {ECO:0000255|HAMAP-Rule:MF_01325}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. Forms a cluster with
CC proteins L14 and L24e. {ECO:0000255|HAMAP-Rule:MF_01325}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL3 family.
CC {ECO:0000255|HAMAP-Rule:MF_01325}.
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DR EMBL; AP006878; BAD85731.1; -; Genomic_DNA.
DR RefSeq; WP_011250493.1; NC_006624.1.
DR PDB; 6SKF; EM; 2.95 A; BD=1-346.
DR PDB; 6SKG; EM; 2.65 A; BD=1-346.
DR PDB; 6TH6; EM; 2.55 A; BD=1-346.
DR PDBsum; 6SKF; -.
DR PDBsum; 6SKG; -.
DR PDBsum; 6TH6; -.
DR AlphaFoldDB; Q5JDJ0; -.
DR SMR; Q5JDJ0; -.
DR STRING; 69014.TK1542; -.
DR PRIDE; Q5JDJ0; -.
DR EnsemblBacteria; BAD85731; BAD85731; TK1542.
DR GeneID; 3235329; -.
DR KEGG; tko:TK1542; -.
DR PATRIC; fig|69014.16.peg.1502; -.
DR eggNOG; arCOG04070; Archaea.
DR HOGENOM; CLU_033361_2_0_2; -.
DR InParanoid; Q5JDJ0; -.
DR OMA; HQRTEYN; -.
DR OrthoDB; 31722at2157; -.
DR PhylomeDB; Q5JDJ0; -.
DR Proteomes; UP000000536; Chromosome.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR Gene3D; 4.10.960.10; -; 1.
DR HAMAP; MF_01325_A; Ribosomal_L3_A; 1.
DR InterPro; IPR045077; L3_arc_euk.
DR InterPro; IPR000597; Ribosomal_L3.
DR InterPro; IPR019928; Ribosomal_L3_arc.
DR InterPro; IPR019926; Ribosomal_L3_CS.
DR InterPro; IPR044892; Ribosomal_L3_dom_3_arc_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR PANTHER; PTHR11363; PTHR11363; 1.
DR Pfam; PF00297; Ribosomal_L3; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
DR TIGRFAMs; TIGR03626; L3_arch; 1.
DR PROSITE; PS00474; RIBOSOMAL_L3; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..346
FT /note="50S ribosomal protein L3"
FT /id="PRO_0000077220"
FT REGION 324..346
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 346 AA; 39047 MW; 19B26D0E420AF98D CRC64;
MGKIHRPRRG SLAYSPRKRA KSIVPRIRSW PKDSEVRMLG FAGYKAGMTH ILMIDDSPGL
TKGKEIFVPV TIVEVPPLFV YGIRAYKQGY LGLETATEVW FHDLHKNVAR RIKTLPKNYN
EEAFQAKLGQ LEDLVNDGEI ADVRLLVHTQ PWLIGLKKKP EVMEYAIGGD DVKAKFDYAK
EKIGKELRAG EVLHEGELLD VIAVTKGKGT QGPVKRWGVK VQFHKAQRAG KGRHIGNLGP
WHPARVMWTV PQAGQMGFHH RTEFNKRLIA IGENGKLVLD GNEIEITPKG GFPHYGIVRS
DFLMIEGTIP GSFKRIIRVR PAIRPPKKKP PVERPQITYV SRESKQ
