RL40_METAC
ID RL40_METAC Reviewed; 49 AA.
AC Q8TJ19;
DT 07-JUN-2004, integrated into UniProtKB/Swiss-Prot.
DT 07-JUN-2004, sequence version 2.
DT 25-MAY-2022, entry version 85.
DE RecName: Full=50S ribosomal protein L40e {ECO:0000255|HAMAP-Rule:MF_00788};
GN Name=rpl40e {ECO:0000255|HAMAP-Rule:MF_00788}; OrderedLocusNames=MA_3970;
OS Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
OS C2A).
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanosarcinales; Methanosarcinaceae; Methanosarcina.
OX NCBI_TaxID=188937;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35395 / DSM 2834 / JCM 12185 / C2A;
RX PubMed=11932238; DOI=10.1101/gr.223902;
RA Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W.,
RA Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J.,
RA Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P.,
RA McKernan K., Talamas J., Tirrell A., Ye W., Zimmer A., Barber R.D.,
RA Cann I., Graham D.E., Grahame D.A., Guss A.M., Hedderich R.,
RA Ingram-Smith C., Kuettner H.C., Krzycki J.A., Leigh J.A., Li W., Liu J.,
RA Mukhopadhyay B., Reeve J.N., Smith K., Springer T.A., Umayam L.A.,
RA White O., White R.H., de Macario E.C., Ferry J.G., Jarrell K.F., Jing H.,
RA Macario A.J.L., Paulsen I.T., Pritchett M., Sowers K.R., Swanson R.V.,
RA Zinder S.H., Lander E., Metcalf W.W., Birren B.;
RT "The genome of Methanosarcina acetivorans reveals extensive metabolic and
RT physiological diversity.";
RL Genome Res. 12:532-542(2002).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL40 family.
CC {ECO:0000255|HAMAP-Rule:MF_00788}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAM07320.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AE010299; AAM07320.1; ALT_INIT; Genomic_DNA.
DR RefSeq; WP_048065861.1; NC_003552.1.
DR AlphaFoldDB; Q8TJ19; -.
DR SMR; Q8TJ19; -.
DR STRING; 188937.MA_3970; -.
DR EnsemblBacteria; AAM07320; AAM07320; MA_3970.
DR GeneID; 1475863; -.
DR KEGG; mac:MA_3970; -.
DR HOGENOM; CLU_205640_0_0_2; -.
DR InParanoid; Q8TJ19; -.
DR OrthoDB; 127293at2157; -.
DR PhylomeDB; Q8TJ19; -.
DR Proteomes; UP000002487; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 4.10.1060.50; -; 1.
DR HAMAP; MF_00788; Ribosomal_L40e; 1.
DR InterPro; IPR038587; L40e_sf.
DR InterPro; IPR001975; Ribosomal_L40e.
DR InterPro; IPR023657; Ribosomal_L40e_arc.
DR InterPro; IPR011332; Ribosomal_zn-bd.
DR PANTHER; PTHR39649; PTHR39649; 1.
DR Pfam; PF01020; Ribosomal_L40e; 1.
DR SMART; SM01377; Ribosomal_L40e; 1.
DR SUPFAM; SSF57829; SSF57829; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..49
FT /note="50S ribosomal protein L40e"
FT /id="PRO_0000138780"
SQ SEQUENCE 49 AA; 5589 MW; 4249D7CCB7F1B02B CRC64;
MARFPEAEER LLNKKICMKC NARNAIRATR CRKCGYGTLR VKSKESKGA