RL40_PYRAB
ID RL40_PYRAB Reviewed; 51 AA.
AC P62006; G8ZH51; O74010;
DT 07-JUN-2004, integrated into UniProtKB/Swiss-Prot.
DT 07-JUN-2004, sequence version 1.
DT 25-MAY-2022, entry version 77.
DE RecName: Full=50S ribosomal protein L40e {ECO:0000255|HAMAP-Rule:MF_00788};
GN Name=rpl40e {ECO:0000255|HAMAP-Rule:MF_00788};
GN OrderedLocusNames=PYRAB08410; ORFNames=PAB7211;
OS Pyrococcus abyssi (strain GE5 / Orsay).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=272844;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GE5 / Orsay;
RX PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA Weissenbach J., Zivanovic Y., Forterre P.;
RT "An integrated analysis of the genome of the hyperthermophilic archaeon
RT Pyrococcus abyssi.";
RL Mol. Microbiol. 47:1495-1512(2003).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=GE5 / Orsay;
RX PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA Gao J., Wang J.;
RT "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT Pyrococcus furiosus DSM 3638.";
RL Curr. Microbiol. 64:118-129(2012).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL40 family.
CC {ECO:0000255|HAMAP-Rule:MF_00788}.
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DR EMBL; AJ248285; CAB49755.1; -; Genomic_DNA.
DR EMBL; HE613800; CCE70246.1; -; Genomic_DNA.
DR PIR; B75130; B75130.
DR RefSeq; WP_010867964.1; NC_000868.1.
DR AlphaFoldDB; P62006; -.
DR SMR; P62006; -.
DR STRING; 272844.PAB7211; -.
DR EnsemblBacteria; CAB49755; CAB49755; PAB7211.
DR GeneID; 1496190; -.
DR KEGG; pab:PAB7211; -.
DR PATRIC; fig|272844.11.peg.890; -.
DR eggNOG; arCOG04049; Archaea.
DR HOGENOM; CLU_205640_0_0_2; -.
DR OMA; MRCGATN; -.
DR OrthoDB; 127293at2157; -.
DR PhylomeDB; P62006; -.
DR Proteomes; UP000000810; Chromosome.
DR Proteomes; UP000009139; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 4.10.1060.50; -; 1.
DR HAMAP; MF_00788; Ribosomal_L40e; 1.
DR InterPro; IPR038587; L40e_sf.
DR InterPro; IPR001975; Ribosomal_L40e.
DR InterPro; IPR023657; Ribosomal_L40e_arc.
DR InterPro; IPR011332; Ribosomal_zn-bd.
DR PANTHER; PTHR39649; PTHR39649; 1.
DR SMART; SM01377; Ribosomal_L40e; 1.
DR SUPFAM; SSF57829; SSF57829; 1.
PE 3: Inferred from homology;
KW Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..51
FT /note="50S ribosomal protein L40e"
FT /id="PRO_0000138785"
SQ SEQUENCE 51 AA; 5885 MW; 7B21ADB67A38ABBF CRC64;
MARFPEAEAR IFKKYICLRC GATNPWGAEK CRKCGYKRLR PKAREPRGGG R