RL41_ARATH
ID RL41_ARATH Reviewed; 25 AA.
AC P62120; P35015;
DT 21-JUN-2004, integrated into UniProtKB/Swiss-Prot.
DT 21-JUN-2004, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=60S ribosomal protein L41;
GN Name=RPL41A; OrderedLocusNames=At1g56045; ORFNames=T6H22.15;
GN and
GN Name=RPL41C; OrderedLocusNames=At2g40205; ORFNames=T7M7.26;
GN and
GN Name=RPL41D; OrderedLocusNames=At3g08520; ORFNames=T8G24.5;
GN and
GN Name=RPL41E; OrderedLocusNames=At3g11120; ORFNames=F11B9.31, F9F8.7;
GN and
GN Name=RPL41G; OrderedLocusNames=At3g56020; ORFNames=F27K19_200;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (AT1G56045).
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (AT2G40205).
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (AT3G08520; AT3G11120 AND
RP AT3G56020).
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (AT1G56045; AT2G40205; AT3G08520 AND
RP AT3G11120).
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [6]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL41 family.
CC {ECO:0000305}.
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DR EMBL; AC009894; AAF02845.1; -; Genomic_DNA.
DR EMBL; AC074395; AAG50829.1; -; Genomic_DNA.
DR EMBL; AC009991; AAF01511.1; -; Genomic_DNA.
DR EMBL; AC073395; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AL163832; CAB87856.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE33335.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC09796.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE74643.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75004.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE79467.1; -; Genomic_DNA.
DR EMBL; AY136332; AAM96998.1; -; mRNA.
DR EMBL; BT002078; AAN72089.1; -; mRNA.
DR EMBL; AY062780; AAL32858.1; -; mRNA.
DR EMBL; AY081623; AAM10185.1; -; mRNA.
DR EMBL; AY058053; AAL24161.1; -; mRNA.
DR EMBL; AY098947; AAM19957.1; -; mRNA.
DR EMBL; BT004288; AAO42288.1; -; mRNA.
DR EMBL; BT005635; AAO64055.1; -; mRNA.
DR PIR; T49214; T49214.
DR RefSeq; NP_187465.1; NM_111687.2.
DR RefSeq; NP_187723.1; NM_111949.3.
DR RefSeq; NP_191161.1; NM_115460.3.
DR RefSeq; NP_850328.1; NM_179997.2.
DR RefSeq; NP_974039.1; NM_202310.2.
DR AlphaFoldDB; P62120; -.
DR SMR; P62120; -.
DR PaxDb; P62120; -.
DR PRIDE; P62120; -.
DR EnsemblPlants; AT1G56045.1; AT1G56045.1; AT1G56045.
DR EnsemblPlants; AT2G40205.1; AT2G40205.1; AT2G40205.
DR EnsemblPlants; AT3G08520.1; AT3G08520.1; AT3G08520.
DR EnsemblPlants; AT3G11120.1; AT3G11120.1; AT3G11120.
DR EnsemblPlants; AT3G56020.1; AT3G56020.1; AT3G56020.
DR GeneID; 2745833; -.
DR GeneID; 818612; -.
DR GeneID; 820000; -.
DR GeneID; 820283; -.
DR GeneID; 824768; -.
DR Gramene; AT1G56045.1; AT1G56045.1; AT1G56045.
DR Gramene; AT2G40205.1; AT2G40205.1; AT2G40205.
DR Gramene; AT3G08520.1; AT3G08520.1; AT3G08520.
DR Gramene; AT3G11120.1; AT3G11120.1; AT3G11120.
DR Gramene; AT3G56020.1; AT3G56020.1; AT3G56020.
DR KEGG; ath:AT1G56045; -.
DR KEGG; ath:AT2G40205; -.
DR KEGG; ath:AT3G08520; -.
DR KEGG; ath:AT3G11120; -.
DR KEGG; ath:AT3G56020; -.
DR Araport; AT1G56045; -.
DR Araport; AT2G40205; -.
DR Araport; AT3G08520; -.
DR Araport; AT3G11120; -.
DR Araport; AT3G56020; -.
DR eggNOG; ENOG502SD55; Eukaryota.
DR HOGENOM; CLU_220499_1_0_1; -.
DR PRO; PR:P62120; -.
DR Proteomes; UP000006548; Chromosome 1.
DR Proteomes; UP000006548; Chromosome 2.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; P62120; baseline and differential.
DR Genevisible; P62120; AT.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR InterPro; IPR007836; Ribosomal_L41.
DR Pfam; PF05162; Ribosomal_L41; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..25
FT /note="60S ribosomal protein L41"
FT /id="PRO_0000198063"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 25 AA; 3428 MW; 9AD629D4293C039E CRC64;
MRAKWKKKRM RRLKRKRRKM RQRSK
