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RL4B_SCHPO
ID   RL4B_SCHPO              Reviewed;         363 AA.
AC   Q9P784;
DT   14-AUG-2001, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   25-MAY-2022, entry version 134.
DE   RecName: Full=60S ribosomal protein L4-B;
GN   Name=rpl401; Synonyms=rpl4b; ORFNames=SPBC1711.06;
OS   Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC   Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC   Schizosaccharomyces.
OX   NCBI_TaxID=284812;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=972 / ATCC 24843;
RX   PubMed=11859360; DOI=10.1038/nature724;
RA   Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA   Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA   Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA   Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA   Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA   Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA   Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA   Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA   O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA   Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA   Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA   Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA   Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA   Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA   Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA   Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA   Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA   Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA   Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA   Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA   del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA   Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA   Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA   Nurse P.;
RT   "The genome sequence of Schizosaccharomyces pombe.";
RL   Nature 415:871-880(2002).
CC   -!- MISCELLANEOUS: There are two genes for L4 in S.pombe.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL4 family.
CC       {ECO:0000305}.
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DR   EMBL; CU329671; CAB88236.1; -; Genomic_DNA.
DR   RefSeq; NP_595879.1; NM_001021785.2.
DR   AlphaFoldDB; Q9P784; -.
DR   SMR; Q9P784; -.
DR   BioGRID; 276330; 10.
DR   STRING; 4896.SPBC1711.06.1; -.
DR   iPTMnet; Q9P784; -.
DR   MaxQB; Q9P784; -.
DR   PaxDb; Q9P784; -.
DR   PRIDE; Q9P784; -.
DR   EnsemblFungi; SPBC1711.06.1; SPBC1711.06.1:pep; SPBC1711.06.
DR   GeneID; 2539780; -.
DR   KEGG; spo:SPBC1711.06; -.
DR   PomBase; SPBC1711.06; rpl401.
DR   VEuPathDB; FungiDB:SPBC1711.06; -.
DR   eggNOG; KOG1475; Eukaryota.
DR   HOGENOM; CLU_026535_0_1_1; -.
DR   InParanoid; Q9P784; -.
DR   OMA; PCIICNE; -.
DR   PhylomeDB; Q9P784; -.
DR   Reactome; R-SPO-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR   Reactome; R-SPO-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR   Reactome; R-SPO-72689; Formation of a pool of free 40S subunits.
DR   Reactome; R-SPO-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR   Reactome; R-SPO-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR   Reactome; R-SPO-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR   PRO; PR:Q9P784; -.
DR   Proteomes; UP000002485; Chromosome II.
DR   GO; GO:0005829; C:cytosol; HDA:PomBase.
DR   GO; GO:0022625; C:cytosolic large ribosomal subunit; ISO:PomBase.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0003735; F:structural constituent of ribosome; ISO:PomBase.
DR   GO; GO:0002181; P:cytoplasmic translation; ISO:PomBase.
DR   Gene3D; 3.40.1370.10; -; 1.
DR   InterPro; IPR025755; Ribos_L4_C_dom.
DR   InterPro; IPR002136; Ribosomal_L4/L1e.
DR   InterPro; IPR013000; Ribosomal_L4/L1e_euk/arc_CS.
DR   InterPro; IPR023574; Ribosomal_L4_dom_sf.
DR   InterPro; IPR045240; Ribosomal_L4_euk/arch.
DR   PANTHER; PTHR19431; PTHR19431; 1.
DR   Pfam; PF14374; Ribos_L4_asso_C; 1.
DR   Pfam; PF00573; Ribosomal_L4; 1.
DR   SUPFAM; SSF52166; SSF52166; 1.
DR   PROSITE; PS00939; RIBOSOMAL_L1E; 1.
PE   3: Inferred from homology;
KW   Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT   CHAIN           1..363
FT                   /note="60S ribosomal protein L4-B"
FT                   /id="PRO_0000129366"
SQ   SEQUENCE   363 AA;  39910 MW;  201ED180277DDD90 CRC64;
     MAAARPTVSI YNKDGSVSSE TLALPFVFKA PIRPDLVRSV HTAVAKNKRQ PYAVSEKAGH
     QTSAESWGTG RALARIPRVG GGGTHRSGQA AFGNMCRSGR MFAPTKTWRK WHVKVNQNEK
     RYAIASAVAA SGVPSLLLAR GHRIEEIPEV PLVVDDAVQS FQKTKEAVAL LKEIKAYRDV
     IKVANSRKLR AGKGKLRNRR HVQRRGPLVV FNEDTGIVKA FRNIPGVEIV NVRRLNLLQL
     APGGHLGRFV IWTKSAFGLL DSVFGSTTEV AQLKKNYFLP ENIISNADVT RLINSDEIQS
     IVKAAGPSRV KRAHVQKKNP LKNKAVLSRL NPYAKAYKAN VKINSEKTPK AAGEKFLSVL
     HEN
 
 
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