RL4_SYNP6
ID RL4_SYNP6 Reviewed; 210 AA.
AC O24690;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=50S ribosomal protein L4 {ECO:0000255|HAMAP-Rule:MF_01328};
GN Name=rplD {ECO:0000255|HAMAP-Rule:MF_01328};
GN Synonyms=rpl4 {ECO:0000255|HAMAP-Rule:MF_01328};
GN OrderedLocusNames=syc1866_d;
OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis
OS nidulans).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus.
OX NCBI_TaxID=269084;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=9300823; DOI=10.1016/s0378-1119(97)00169-8;
RA Sugita M., Sugishita H., Fujishiro T., Tsuboi M., Sugita C., Endo T.,
RA Sugiura M.;
RT "Organization of a large gene cluster encoding ribosomal proteins in the
RT cyanobacterium Synechococcus sp. strain PCC 6301: comparison of gene
RT clusters among cyanobacteria, eubacteria and chloroplast genomes.";
RL Gene 195:73-79(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 27144 / PCC 6301 / SAUG 1402/1;
RX PubMed=17211581; DOI=10.1007/s11120-006-9122-4;
RA Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M.,
RA Kanehisa M., Omata T., Sugiura M., Sugita M.;
RT "Complete nucleotide sequence of the freshwater unicellular cyanobacterium
RT Synechococcus elongatus PCC 6301 chromosome: gene content and
RT organization.";
RL Photosyn. Res. 93:55-67(2007).
CC -!- FUNCTION: One of the primary rRNA binding proteins, this protein
CC initially binds near the 5'-end of the 23S rRNA. It is important during
CC the early stages of 50S assembly. It makes multiple contacts with
CC different domains of the 23S rRNA in the assembled 50S subunit and
CC ribosome. {ECO:0000255|HAMAP-Rule:MF_01328}.
CC -!- FUNCTION: Forms part of the polypeptide exit tunnel.
CC {ECO:0000255|HAMAP-Rule:MF_01328}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01328}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL4 family.
CC {ECO:0000255|HAMAP-Rule:MF_01328}.
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DR EMBL; AB000111; BAA22450.1; -; Genomic_DNA.
DR EMBL; AP008231; BAD80056.1; -; Genomic_DNA.
DR RefSeq; WP_011244176.1; NC_006576.1.
DR AlphaFoldDB; O24690; -.
DR SMR; O24690; -.
DR STRING; 269084.syc1866_d; -.
DR EnsemblBacteria; BAD80056; BAD80056; syc1866_d.
DR KEGG; syc:syc1866_d; -.
DR eggNOG; COG0088; Bacteria.
DR OMA; PQVHILE; -.
DR Proteomes; UP000001175; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.1370.10; -; 1.
DR HAMAP; MF_01328_B; Ribosomal_L4_B; 1.
DR InterPro; IPR002136; Ribosomal_L4/L1e.
DR InterPro; IPR023574; Ribosomal_L4_dom_sf.
DR InterPro; IPR013005; Ribosomal_uL4/L1e.
DR PANTHER; PTHR10746; PTHR10746; 1.
DR Pfam; PF00573; Ribosomal_L4; 1.
DR SUPFAM; SSF52166; SSF52166; 1.
DR TIGRFAMs; TIGR03953; rplD_bact; 1.
PE 3: Inferred from homology;
KW Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1..210
FT /note="50S ribosomal protein L4"
FT /id="PRO_0000129296"
FT REGION 43..80
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 210 AA; 23203 MW; 1E6670C8BA03F179 CRC64;
MVDYVIQDWQ GQTAGNITVE LRVAKEESAA AIVHRALIRQ LANARQGTHA SKTRSEVRGG
GRKPWKQKGT GRARAGSIRS PLWRGGGVIF GPKPRDYSVK MNRKERRLAL RTALISRSAD
LVVVQEFADQ ISRPKTRDVA EALTRWGVEP GVKVLLITAD RDQNVELSVR NLPNVKLITA
TNLNIFDLLN ADRIVSTSAA LEKIQEVYGG
