RL5_ACIB5
ID RL5_ACIB5 Reviewed; 178 AA.
AC B7IA27;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 1.
DT 03-AUG-2022, entry version 69.
DE RecName: Full=50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333};
GN Name=rplE {ECO:0000255|HAMAP-Rule:MF_01333}; OrderedLocusNames=AB57_3518;
OS Acinetobacter baumannii (strain AB0057).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Moraxellales; Moraxellaceae;
OC Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.
OX NCBI_TaxID=480119;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AB0057;
RX PubMed=18931120; DOI=10.1128/jb.00834-08;
RA Adams M.D., Goglin K., Molyneaux N., Hujer K.M., Lavender H., Jamison J.J.,
RA MacDonald I.J., Martin K.M., Russo T., Campagnari A.A., Hujer A.M.,
RA Bonomo R.A., Gill S.R.;
RT "Comparative genome sequence analysis of multidrug-resistant Acinetobacter
RT baumannii.";
RL J. Bacteriol. 190:8053-8064(2008).
CC -!- FUNCTION: This is 1 of the proteins that binds and probably mediates
CC the attachment of the 5S RNA into the large ribosomal subunit, where it
CC forms part of the central protuberance. In the 70S ribosome it contacts
CC protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits;
CC this bridge is implicated in subunit movement. Contacts the P site
CC tRNA; the 5S rRNA and some of its associated proteins might help
CC stabilize positioning of ribosome-bound tRNAs. {ECO:0000255|HAMAP-
CC Rule:MF_01333}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA.
CC Forms a bridge to the 30S subunit in the 70S ribosome.
CC {ECO:0000255|HAMAP-Rule:MF_01333}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL5 family.
CC {ECO:0000255|HAMAP-Rule:MF_01333}.
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DR EMBL; CP001182; ACJ42885.1; -; Genomic_DNA.
DR RefSeq; WP_000113197.1; NC_011586.2.
DR PDB; 6V39; EM; 3.04 A; F=1-178.
DR PDB; 6V3A; EM; 2.82 A; F=1-178.
DR PDB; 6V3B; EM; 2.91 A; F=1-178.
DR PDB; 6V3D; EM; 2.95 A; F=1-178.
DR PDB; 7M4V; EM; 2.54 A; F=1-178.
DR PDB; 7M4W; EM; 2.55 A; F=1-178.
DR PDB; 7M4X; EM; 2.66 A; F=1-178.
DR PDB; 7M4Y; EM; 2.50 A; F=1-178.
DR PDB; 7M4Z; EM; 2.92 A; F=1-178.
DR PDB; 7RYF; EM; 2.65 A; F=1-178.
DR PDB; 7RYG; EM; 2.38 A; F=1-178.
DR PDB; 7RYH; EM; 2.43 A; F=1-178.
DR PDBsum; 6V39; -.
DR PDBsum; 6V3A; -.
DR PDBsum; 6V3B; -.
DR PDBsum; 6V3D; -.
DR PDBsum; 7M4V; -.
DR PDBsum; 7M4W; -.
DR PDBsum; 7M4X; -.
DR PDBsum; 7M4Y; -.
DR PDBsum; 7M4Z; -.
DR PDBsum; 7RYF; -.
DR PDBsum; 7RYG; -.
DR PDBsum; 7RYH; -.
DR AlphaFoldDB; B7IA27; -.
DR SMR; B7IA27; -.
DR IntAct; B7IA27; 2.
DR GeneID; 66395752; -.
DR KEGG; abn:AB57_3518; -.
DR HOGENOM; CLU_061015_2_1_6; -.
DR OMA; ERMYAFL; -.
DR Proteomes; UP000007094; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1440.10; -; 1.
DR HAMAP; MF_01333_B; Ribosomal_L5_B; 1.
DR InterPro; IPR002132; Ribosomal_L5.
DR InterPro; IPR020930; Ribosomal_L5_bac-type.
DR InterPro; IPR031309; Ribosomal_L5_C.
DR InterPro; IPR020929; Ribosomal_L5_CS.
DR InterPro; IPR022803; Ribosomal_L5_dom_sf.
DR InterPro; IPR031310; Ribosomal_L5_N.
DR PANTHER; PTHR11994; PTHR11994; 1.
DR Pfam; PF00281; Ribosomal_L5; 1.
DR Pfam; PF00673; Ribosomal_L5_C; 1.
DR PIRSF; PIRSF002161; Ribosomal_L5; 1.
DR SUPFAM; SSF55282; SSF55282; 1.
DR PROSITE; PS00358; RIBOSOMAL_L5; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding; tRNA-binding.
FT CHAIN 1..178
FT /note="50S ribosomal protein L5"
FT /id="PRO_1000142341"
FT HELIX 6..20
FT /evidence="ECO:0007829|PDB:7M4V"
FT STRAND 31..38
FT /evidence="ECO:0007829|PDB:7M4V"
FT TURN 44..46
FT /evidence="ECO:0007829|PDB:7M4V"
FT HELIX 49..60
FT /evidence="ECO:0007829|PDB:7M4V"
FT STRAND 61..63
FT /evidence="ECO:0007829|PDB:7M4V"
FT STRAND 66..69
FT /evidence="ECO:0007829|PDB:7M4V"
FT STRAND 75..78
FT /evidence="ECO:0007829|PDB:7M4V"
FT STRAND 84..92
FT /evidence="ECO:0007829|PDB:7M4V"
FT HELIX 93..106
FT /evidence="ECO:0007829|PDB:7M4V"
FT TURN 107..110
FT /evidence="ECO:0007829|PDB:7M4V"
FT STRAND 124..126
FT /evidence="ECO:0007829|PDB:7M4V"
FT STRAND 128..134
FT /evidence="ECO:0007829|PDB:7M4V"
FT STRAND 138..140
FT /evidence="ECO:0007829|PDB:7M4V"
FT STRAND 152..158
FT /evidence="ECO:0007829|PDB:7M4V"
FT HELIX 163..173
FT /evidence="ECO:0007829|PDB:7M4V"
SQ SEQUENCE 178 AA; 20020 MW; 7E80733038FBCB37 CRC64;
MARLKARYND ELKAKLQEEL SIKNVMEIPR ITKITLNMGV GAAATDKKLL DGAVADMQLI
AGQKPVVTLA RKSIAGFKIR DGWPIGCKVT LRGDQMYEFL DRLISIAIPR IRDFRGFSAK
SFDGRGNYSM GLKEQIVFPE IDFDKIDRIR GMDITITTTA RTDDEGRALM RAFGFPFK
