RL5_ENTFA
ID RL5_ENTFA Reviewed; 179 AA.
AC Q839F2;
DT 19-JUL-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333};
GN Name=rplE {ECO:0000255|HAMAP-Rule:MF_01333}; OrderedLocusNames=EF_0218;
OS Enterococcus faecalis (strain ATCC 700802 / V583).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae;
OC Enterococcus.
OX NCBI_TaxID=226185;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700802 / V583;
RX PubMed=12663927; DOI=10.1126/science.1080613;
RA Paulsen I.T., Banerjei L., Myers G.S.A., Nelson K.E., Seshadri R.,
RA Read T.D., Fouts D.E., Eisen J.A., Gill S.R., Heidelberg J.F., Tettelin H.,
RA Dodson R.J., Umayam L.A., Brinkac L.M., Beanan M.J., Daugherty S.C.,
RA DeBoy R.T., Durkin S.A., Kolonay J.F., Madupu R., Nelson W.C.,
RA Vamathevan J.J., Tran B., Upton J., Hansen T., Shetty J., Khouri H.M.,
RA Utterback T.R., Radune D., Ketchum K.A., Dougherty B.A., Fraser C.M.;
RT "Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus
RT faecalis.";
RL Science 299:2071-2074(2003).
CC -!- FUNCTION: This is 1 of the proteins that binds and probably mediates
CC the attachment of the 5S RNA into the large ribosomal subunit, where it
CC forms part of the central protuberance. In the 70S ribosome it contacts
CC protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits;
CC this bridge is implicated in subunit movement. Contacts the P site
CC tRNA; the 5S rRNA and some of its associated proteins might help
CC stabilize positioning of ribosome-bound tRNAs. {ECO:0000255|HAMAP-
CC Rule:MF_01333}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA.
CC Forms a bridge to the 30S subunit in the 70S ribosome.
CC {ECO:0000255|HAMAP-Rule:MF_01333}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL5 family.
CC {ECO:0000255|HAMAP-Rule:MF_01333}.
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DR EMBL; AE016830; AAO80087.1; -; Genomic_DNA.
DR RefSeq; NP_814016.1; NC_004668.1.
DR RefSeq; WP_002356213.1; NZ_KE136524.1.
DR PDB; 6WU9; EM; 2.90 A; F=2-178.
DR PDB; 7P7R; EM; 2.90 A; J=1-179.
DR PDBsum; 6WU9; -.
DR PDBsum; 7P7R; -.
DR AlphaFoldDB; Q839F2; -.
DR SMR; Q839F2; -.
DR STRING; 226185.EF_0218; -.
DR EnsemblBacteria; AAO80087; AAO80087; EF_0218.
DR GeneID; 60892713; -.
DR KEGG; efa:EF0218; -.
DR PATRIC; fig|226185.45.peg.48; -.
DR eggNOG; COG0094; Bacteria.
DR HOGENOM; CLU_061015_2_1_9; -.
DR OMA; ERMYAFL; -.
DR Proteomes; UP000001415; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1440.10; -; 1.
DR HAMAP; MF_01333_B; Ribosomal_L5_B; 1.
DR InterPro; IPR002132; Ribosomal_L5.
DR InterPro; IPR020930; Ribosomal_L5_bac-type.
DR InterPro; IPR031309; Ribosomal_L5_C.
DR InterPro; IPR020929; Ribosomal_L5_CS.
DR InterPro; IPR022803; Ribosomal_L5_dom_sf.
DR InterPro; IPR031310; Ribosomal_L5_N.
DR PANTHER; PTHR11994; PTHR11994; 1.
DR Pfam; PF00281; Ribosomal_L5; 1.
DR Pfam; PF00673; Ribosomal_L5_C; 1.
DR PIRSF; PIRSF002161; Ribosomal_L5; 1.
DR SUPFAM; SSF55282; SSF55282; 1.
DR PROSITE; PS00358; RIBOSOMAL_L5; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding; tRNA-binding.
FT CHAIN 1..179
FT /note="50S ribosomal protein L5"
FT /id="PRO_0000124928"
FT HELIX 5..19
FT /evidence="ECO:0007829|PDB:6WU9"
FT STRAND 23..25
FT /evidence="ECO:0007829|PDB:6WU9"
FT STRAND 31..38
FT /evidence="ECO:0007829|PDB:6WU9"
FT TURN 43..45
FT /evidence="ECO:0007829|PDB:6WU9"
FT HELIX 50..60
FT /evidence="ECO:0007829|PDB:6WU9"
FT STRAND 61..63
FT /evidence="ECO:0007829|PDB:6WU9"
FT HELIX 75..77
FT /evidence="ECO:0007829|PDB:6WU9"
FT STRAND 86..91
FT /evidence="ECO:0007829|PDB:6WU9"
FT HELIX 93..105
FT /evidence="ECO:0007829|PDB:6WU9"
FT HELIX 108..110
FT /evidence="ECO:0007829|PDB:6WU9"
FT TURN 123..125
FT /evidence="ECO:0007829|PDB:6WU9"
FT STRAND 138..141
FT /evidence="ECO:0007829|PDB:6WU9"
FT STRAND 153..158
FT /evidence="ECO:0007829|PDB:6WU9"
FT HELIX 163..171
FT /evidence="ECO:0007829|PDB:6WU9"
SQ SEQUENCE 179 AA; 20093 MW; 90FA66C8D7D3A304 CRC64;
MNRLKEKYIK EVTPSLVEKF NYSSVMQTPK VDKIVINMGV GDAVSNAKNL DKAVEELALI
TGQKPLITKA KKSIAGFRLR EGMPIGAKVT LRGERMYEFL DKLVTVSLPR VRDFHGVSKK
AFDGRGNYTL GIKEQLIFPE VDYDLVDKVR GMDIVIVTTA NTDEESRELL AQLGMPFQK