RL5_MYCCT
ID RL5_MYCCT Reviewed; 180 AA.
AC P10136; Q2SRG5;
DT 01-JUL-1989, integrated into UniProtKB/Swiss-Prot.
DT 21-MAR-2006, sequence version 2.
DT 25-MAY-2022, entry version 125.
DE RecName: Full=50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333};
GN Name=rplE {ECO:0000255|HAMAP-Rule:MF_01333}; OrderedLocusNames=MCAP_0684;
OS Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343
OS / NCTC 10154).
OC Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.
OX NCBI_TaxID=340047;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=3481422; DOI=10.1007/bf00325700;
RA Ohkubo S., Muto A., Kawauchi Y., Yamao F., Osawa S.;
RT "The ribosomal protein gene cluster of Mycoplasma capricolum.";
RL Mol. Gen. Genet. 210:314-322(1987).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=California kid / ATCC 27343 / NCTC 10154;
RA Glass J.I., Lartigue C., Pfannkoch C., Baden-Tillson H., Smith H.O.,
RA Venter J.C., Roske K., Wise K.S., Calcutt M.J., Nelson W.C., Nierman W.C.;
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: This is 1 of the proteins that binds and probably mediates
CC the attachment of the 5S RNA into the large ribosomal subunit, where it
CC forms part of the central protuberance. In the 70S ribosome it contacts
CC protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits;
CC this bridge is implicated in subunit movement. Contacts the P site
CC tRNA; the 5S rRNA and some of its associated proteins might help
CC stabilize positioning of ribosome-bound tRNAs. {ECO:0000255|HAMAP-
CC Rule:MF_01333}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA.
CC Forms a bridge to the 30S subunit in the 70S ribosome.
CC {ECO:0000255|HAMAP-Rule:MF_01333}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL5 family.
CC {ECO:0000255|HAMAP-Rule:MF_01333}.
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DR EMBL; X06414; CAA29716.1; -; Genomic_DNA.
DR EMBL; CP000123; ABC01395.1; -; Genomic_DNA.
DR PIR; S02843; R5YM5C.
DR RefSeq; WP_011387537.1; NC_007633.1.
DR AlphaFoldDB; P10136; -.
DR SMR; P10136; -.
DR EnsemblBacteria; ABC01395; ABC01395; MCAP_0684.
DR GeneID; 23778362; -.
DR KEGG; mcp:MCAP_0684; -.
DR HOGENOM; CLU_061015_2_1_14; -.
DR OMA; ERMYAFL; -.
DR OrthoDB; 1456375at2; -.
DR PhylomeDB; P10136; -.
DR Proteomes; UP000001928; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1440.10; -; 1.
DR HAMAP; MF_01333_B; Ribosomal_L5_B; 1.
DR InterPro; IPR002132; Ribosomal_L5.
DR InterPro; IPR020930; Ribosomal_L5_bac-type.
DR InterPro; IPR031309; Ribosomal_L5_C.
DR InterPro; IPR020929; Ribosomal_L5_CS.
DR InterPro; IPR022803; Ribosomal_L5_dom_sf.
DR InterPro; IPR031310; Ribosomal_L5_N.
DR PANTHER; PTHR11994; PTHR11994; 1.
DR Pfam; PF00281; Ribosomal_L5; 1.
DR Pfam; PF00673; Ribosomal_L5_C; 1.
DR PIRSF; PIRSF002161; Ribosomal_L5; 1.
DR SUPFAM; SSF55282; SSF55282; 1.
DR PROSITE; PS00358; RIBOSOMAL_L5; 1.
PE 3: Inferred from homology;
KW Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding;
KW tRNA-binding.
FT CHAIN 1..180
FT /note="50S ribosomal protein L5"
FT /id="PRO_0000124947"
FT CONFLICT 15
FT /note="P -> L (in Ref. 1; CAA29716)"
FT /evidence="ECO:0000305"
FT CONFLICT 130
FT /note="T -> Y (in Ref. 1; CAA29716)"
FT /evidence="ECO:0000305"
FT CONFLICT 144
FT /note="Y -> H (in Ref. 1; CAA29716)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 180 AA; 20377 MW; 7671A2D8C0B68FFD CRC64;
MKSRLEIKYK DQIVPELFKE LNYKSIMQVP KIQKIVINMG IGDATTDPKK LDAAIFELEK
LSGQKPIVTK AKKSLAVFKL REGMAIGAKV TLRGKKMYDF LDKLINVALP RVRDFRGVSK
TSFDGFGNFT TGIKEQIIFP EVDYDKVIRL RGMDITIVTS AKTNKEAFAL LQKIGMPFEK