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RL5_MYCCT
ID   RL5_MYCCT               Reviewed;         180 AA.
AC   P10136; Q2SRG5;
DT   01-JUL-1989, integrated into UniProtKB/Swiss-Prot.
DT   21-MAR-2006, sequence version 2.
DT   25-MAY-2022, entry version 125.
DE   RecName: Full=50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333};
GN   Name=rplE {ECO:0000255|HAMAP-Rule:MF_01333}; OrderedLocusNames=MCAP_0684;
OS   Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343
OS   / NCTC 10154).
OC   Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.
OX   NCBI_TaxID=340047;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=3481422; DOI=10.1007/bf00325700;
RA   Ohkubo S., Muto A., Kawauchi Y., Yamao F., Osawa S.;
RT   "The ribosomal protein gene cluster of Mycoplasma capricolum.";
RL   Mol. Gen. Genet. 210:314-322(1987).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=California kid / ATCC 27343 / NCTC 10154;
RA   Glass J.I., Lartigue C., Pfannkoch C., Baden-Tillson H., Smith H.O.,
RA   Venter J.C., Roske K., Wise K.S., Calcutt M.J., Nelson W.C., Nierman W.C.;
RL   Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: This is 1 of the proteins that binds and probably mediates
CC       the attachment of the 5S RNA into the large ribosomal subunit, where it
CC       forms part of the central protuberance. In the 70S ribosome it contacts
CC       protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits;
CC       this bridge is implicated in subunit movement. Contacts the P site
CC       tRNA; the 5S rRNA and some of its associated proteins might help
CC       stabilize positioning of ribosome-bound tRNAs. {ECO:0000255|HAMAP-
CC       Rule:MF_01333}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC       rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA.
CC       Forms a bridge to the 30S subunit in the 70S ribosome.
CC       {ECO:0000255|HAMAP-Rule:MF_01333}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL5 family.
CC       {ECO:0000255|HAMAP-Rule:MF_01333}.
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DR   EMBL; X06414; CAA29716.1; -; Genomic_DNA.
DR   EMBL; CP000123; ABC01395.1; -; Genomic_DNA.
DR   PIR; S02843; R5YM5C.
DR   RefSeq; WP_011387537.1; NC_007633.1.
DR   AlphaFoldDB; P10136; -.
DR   SMR; P10136; -.
DR   EnsemblBacteria; ABC01395; ABC01395; MCAP_0684.
DR   GeneID; 23778362; -.
DR   KEGG; mcp:MCAP_0684; -.
DR   HOGENOM; CLU_061015_2_1_14; -.
DR   OMA; ERMYAFL; -.
DR   OrthoDB; 1456375at2; -.
DR   PhylomeDB; P10136; -.
DR   Proteomes; UP000001928; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.1440.10; -; 1.
DR   HAMAP; MF_01333_B; Ribosomal_L5_B; 1.
DR   InterPro; IPR002132; Ribosomal_L5.
DR   InterPro; IPR020930; Ribosomal_L5_bac-type.
DR   InterPro; IPR031309; Ribosomal_L5_C.
DR   InterPro; IPR020929; Ribosomal_L5_CS.
DR   InterPro; IPR022803; Ribosomal_L5_dom_sf.
DR   InterPro; IPR031310; Ribosomal_L5_N.
DR   PANTHER; PTHR11994; PTHR11994; 1.
DR   Pfam; PF00281; Ribosomal_L5; 1.
DR   Pfam; PF00673; Ribosomal_L5_C; 1.
DR   PIRSF; PIRSF002161; Ribosomal_L5; 1.
DR   SUPFAM; SSF55282; SSF55282; 1.
DR   PROSITE; PS00358; RIBOSOMAL_L5; 1.
PE   3: Inferred from homology;
KW   Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding;
KW   tRNA-binding.
FT   CHAIN           1..180
FT                   /note="50S ribosomal protein L5"
FT                   /id="PRO_0000124947"
FT   CONFLICT        15
FT                   /note="P -> L (in Ref. 1; CAA29716)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        130
FT                   /note="T -> Y (in Ref. 1; CAA29716)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        144
FT                   /note="Y -> H (in Ref. 1; CAA29716)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   180 AA;  20377 MW;  7671A2D8C0B68FFD CRC64;
     MKSRLEIKYK DQIVPELFKE LNYKSIMQVP KIQKIVINMG IGDATTDPKK LDAAIFELEK
     LSGQKPIVTK AKKSLAVFKL REGMAIGAKV TLRGKKMYDF LDKLINVALP RVRDFRGVSK
     TSFDGFGNFT TGIKEQIIFP EVDYDKVIRL RGMDITIVTS AKTNKEAFAL LQKIGMPFEK
 
 
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