RL5_THET8
ID RL5_THET8 Reviewed; 182 AA.
AC Q5SHQ0;
DT 29-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 25-MAY-2022, entry version 151.
DE RecName: Full=50S ribosomal protein L5;
GN Name=rplE; OrderedLocusNames=TTHA1680;
OS Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8).
OC Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.
OX NCBI_TaxID=300852;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=1764514; DOI=10.1016/0300-9084(91)90046-4;
RA Jahn O., Hartmann R.K., Boeckh T., Erdmann V.A.;
RT "Comparative analysis of ribosomal protein L5 sequences from bacteria of
RT the genus Thermus.";
RL Biochimie 73:669-678(1991).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 27634 / DSM 579 / HB8;
RA Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T.,
RA Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.;
RT "Complete genome sequence of Thermus thermophilus HB8.";
RL Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP PROTEIN SEQUENCE OF 2-44, AND ISOLATION OF 5S RRNA-ASSOCIATED COMPLEXES.
RA Kim J.-S., Boysen R.I., Schroeder W., Erdmann V.A., Gessner R.V.;
RT "Identification, purification and partial sequence of four Thermus
RT thermophilus 5S rRNA binding proteins.";
RL Endocyt. Cell Res. 11:177-194(1996).
RN [4]
RP PROTEIN SEQUENCE OF 2-41.
RA Boysen R.I., Lorenz S., Kim J.S., Schroeder W.F.K.J., Erdmann V.A.;
RT "The isolation and complete amino acid sequence of the ribosomal protein
RT L36 from Thermus thermophilus and its zinc-binding motif.";
RL Endocyt. Cell Res. 11:41-58(1995).
RN [5]
RP PROTEIN SEQUENCE OF 2-28.
RC STRAIN=ATCC 27634 / DSM 579 / HB8;
RX PubMed=11154066; DOI=10.1515/bc.2000.133;
RA Katsani K.R., Tsiboli P., Anagnostopoulos K., Urlaub H.,
RA Choli-Papadopoulou T.;
RT "Identification of the 50S ribosomal proteins from the eubacterium Thermus
RT thermophilus.";
RL Biol. Chem. 381:1079-1087(2000).
RN [6]
RP MASS SPECTROMETRY.
RC STRAIN=ATCC 27634 / DSM 579 / HB8;
RX PubMed=16287167; DOI=10.1002/pmic.200402111;
RA Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.;
RT "Extending ribosomal protein identifications to unsequenced bacterial
RT strains using matrix-assisted laser desorption/ionization mass
RT spectrometry.";
RL Proteomics 5:4818-4831(2005).
RN [7]
RP X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
RX PubMed=11511350; DOI=10.1016/s0092-8674(01)00435-4;
RA Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.;
RT "The path of messenger RNA through the ribosome.";
RL Cell 106:233-241(2001).
RN [8]
RP X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME, AND INTERSUBUNIT
RP BRIDGE FORMATION.
RX PubMed=11283358; DOI=10.1126/science.1060089;
RA Yusupov M.M., Yusupova G.Z., Baucom A., Lieberman K., Earnest T.N.,
RA Cate J.H.D., Noller H.F.;
RT "Crystal structure of the ribosome at 5.5 A resolution.";
RL Science 292:883-896(2001).
RN [9]
RP X-RAY CRYSTALLOGRAPHY (3.45 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH RF2,
RP AND SUBUNIT.
RX PubMed=18988853; DOI=10.1126/science.1164840;
RA Weixlbaumer A., Jin H., Neubauer C., Voorhees R.M., Petry S., Kelley A.C.,
RA Ramakrishnan V.;
RT "Insights into translational termination from the structure of RF2 bound to
RT the ribosome.";
RL Science 322:953-956(2008).
RN [10]
RP X-RAY CRYSTALLOGRAPHY (3.10 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH RF2,
RP AND SUBUNIT.
RX PubMed=20421507; DOI=10.1073/pnas.1003995107;
RA Jin H., Kelley A.C., Loakes D., Ramakrishnan V.;
RT "Structure of the 70S ribosome bound to release factor 2 and a substrate
RT analog provides insights into catalysis of peptide release.";
RL Proc. Natl. Acad. Sci. U.S.A. 107:8593-8598(2010).
CC -!- FUNCTION: This is 1 of the proteins that binds and probably mediates
CC the attachment of the 5S RNA into the large ribosomal subunit, where it
CC forms part of the central protuberance. In the 70S ribosome it contacts
CC protein S13 of the 30S subunit (forming bridge B1b) connecting the head
CC of the 30S subunit to the top of the 50S subunit. The bridge itself
CC contacts the P site tRNA and is implicated in movement during ribosome
CC translocation. Also contacts the P site tRNA independently of the
CC intersubunit bridge; the 5S rRNA and some of its associated proteins
CC might help stabilize positioning of ribosome-bound tRNAs.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC rRNA/L5/L18/L25 (TL5) subcomplex; has also been isolated as a complex
CC with 5S rRNA, RL25 (TL5) and DNA binding protein II. Forms a bridge to
CC the 30S subunit in the 70S ribosome, contacting protein S13; this
CC bridge is straddled by the 5S rRNA. Contacts the P site tRNA.
CC -!- MASS SPECTROMETRY: Mass=20900; Method=MALDI;
CC Evidence={ECO:0000269|PubMed:16287167};
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL5 family.
CC {ECO:0000305}.
CC -!- CAUTION: Note that in Ref.3 it was shown that the initiator methionine
CC is not removed, in PubMed:11154066 it was shown the initiator
CC methionine is removed, and the mass determined in PubMed:16287167 is
CC compatible with initiator methionine removal. {ECO:0000305}.
CC -!- CAUTION: In PubMed:11154066 there is uncertainty about the number of
CC Arg residues at position 10 and whether position 25 is Pro or Tyr.
CC {ECO:0000305}.
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DR EMBL; AP008226; BAD71503.1; -; Genomic_DNA.
DR RefSeq; WP_011228843.1; NC_006461.1.
DR RefSeq; YP_144946.1; NC_006461.1.
DR PDB; 1VVJ; X-ray; 3.44 A; RG/YG=1-182.
DR PDB; 1VY4; X-ray; 2.60 A; BG/DG=1-182.
DR PDB; 1VY5; X-ray; 2.55 A; BG/DG=1-182.
DR PDB; 1VY6; X-ray; 2.90 A; BG/DG=1-182.
DR PDB; 1VY7; X-ray; 2.80 A; BG/DG=1-182.
DR PDB; 4L47; X-ray; 3.22 A; RG/YG=1-182.
DR PDB; 4L71; X-ray; 3.90 A; RG/YG=1-182.
DR PDB; 4LEL; X-ray; 3.90 A; RG/YG=1-182.
DR PDB; 4LFZ; X-ray; 3.92 A; RG/YG=1-182.
DR PDB; 4LNT; X-ray; 2.94 A; RG/YG=1-182.
DR PDB; 4LSK; X-ray; 3.48 A; RG/YG=1-182.
DR PDB; 4LT8; X-ray; 3.14 A; RG/YG=1-182.
DR PDB; 4P6F; X-ray; 3.60 A; RG/YG=1-182.
DR PDB; 4P70; X-ray; 3.68 A; RG/YG=1-182.
DR PDB; 4TUA; X-ray; 3.60 A; RG/YG=1-182.
DR PDB; 4TUB; X-ray; 3.60 A; RG/YG=1-182.
DR PDB; 4TUC; X-ray; 3.60 A; RG/YG=1-182.
DR PDB; 4TUD; X-ray; 3.60 A; RG/YG=1-182.
DR PDB; 4TUE; X-ray; 3.50 A; RG/YG=1-182.
DR PDB; 4V42; X-ray; 5.50 A; RG=1-182.
DR PDB; 4V4P; X-ray; 5.50 A; G=32-38.
DR PDB; 4V4X; X-ray; 5.00 A; G=1-182.
DR PDB; 4V4Y; X-ray; 5.50 A; G=1-182.
DR PDB; 4V4Z; X-ray; 4.51 A; G=1-182.
DR PDB; 4V51; X-ray; 2.80 A; BG/DG=2-182.
DR PDB; 4V5A; X-ray; 3.50 A; BG/DG=2-182.
DR PDB; 4V5C; X-ray; 3.30 A; BG/DG=1-182.
DR PDB; 4V5D; X-ray; 3.50 A; BG/DG=1-182.
DR PDB; 4V5E; X-ray; 3.45 A; BG/DG=1-182.
DR PDB; 4V5F; X-ray; 3.60 A; BG/DG=1-182.
DR PDB; 4V5G; X-ray; 3.60 A; BG/DG=1-182.
DR PDB; 4V5J; X-ray; 3.10 A; BG/DG=1-182.
DR PDB; 4V5K; X-ray; 3.20 A; BG/DG=1-182.
DR PDB; 4V5L; X-ray; 3.10 A; BG=1-182.
DR PDB; 4V5M; EM; 7.80 A; BG=1-182.
DR PDB; 4V5N; EM; 7.60 A; BG=1-182.
DR PDB; 4V5P; X-ray; 3.10 A; BG/DG=1-182.
DR PDB; 4V5Q; X-ray; 3.10 A; BG/DG=1-182.
DR PDB; 4V5R; X-ray; 3.10 A; BG/DG=1-182.
DR PDB; 4V5S; X-ray; 3.10 A; BG/DG=1-182.
DR PDB; 4V68; EM; 6.40 A; BG=2-182.
DR PDB; 4V6A; X-ray; 3.10 A; BG/DG=1-182.
DR PDB; 4V6F; X-ray; 3.10 A; AG/DG=1-182.
DR PDB; 4V6G; X-ray; 3.50 A; BG/DG=1-182.
DR PDB; 4V7J; X-ray; 3.30 A; AG/BG=1-182.
DR PDB; 4V7K; X-ray; 3.60 A; AG/BG=1-182.
DR PDB; 4V7L; X-ray; 3.00 A; BG/DG=1-182.
DR PDB; 4V7M; X-ray; 3.45 A; BG/DG=1-182.
DR PDB; 4V7W; X-ray; 3.00 A; BG/DG=1-182.
DR PDB; 4V7X; X-ray; 3.00 A; BG/DG=1-182.
DR PDB; 4V7Y; X-ray; 3.00 A; BG/DG=1-182.
DR PDB; 4V7Z; X-ray; 3.10 A; BG/DG=1-182.
DR PDB; 4V87; X-ray; 3.10 A; AG/DG=2-182.
DR PDB; 4V8A; X-ray; 3.20 A; AG/BG=1-182.
DR PDB; 4V8B; X-ray; 3.00 A; BG/DG=1-182.
DR PDB; 4V8C; X-ray; 3.30 A; AG/BG=1-182.
DR PDB; 4V8D; X-ray; 3.00 A; BG/DG=1-182.
DR PDB; 4V8E; X-ray; 3.30 A; AG/CG=1-182.
DR PDB; 4V8F; X-ray; 3.30 A; AG/DG=1-182.
DR PDB; 4V8G; X-ray; 3.00 A; BG/DG=1-182.
DR PDB; 4V8H; X-ray; 3.10 A; BG/DG=1-182.
DR PDB; 4V8I; X-ray; 2.70 A; BG/DG=1-182.
DR PDB; 4V8J; X-ray; 3.90 A; BG/DG=1-182.
DR PDB; 4V8N; X-ray; 3.10 A; BG/DG=1-182.
DR PDB; 4V8O; X-ray; 3.80 A; BG=1-182.
DR PDB; 4V8Q; X-ray; 3.10 A; AG=1-182.
DR PDB; 4V8U; X-ray; 3.70 A; BG/DG=1-182.
DR PDB; 4V8X; X-ray; 3.35 A; BG/DG=1-182.
DR PDB; 4V90; X-ray; 2.95 A; BG=2-182.
DR PDB; 4V95; X-ray; 3.20 A; BG/DG=1-182.
DR PDB; 4V97; X-ray; 3.52 A; BG/DG=1-182.
DR PDB; 4V9A; X-ray; 3.30 A; BG/DG=1-182.
DR PDB; 4V9B; X-ray; 3.10 A; BG/DG=1-182.
DR PDB; 4V9H; X-ray; 2.86 A; BG=1-182.
DR PDB; 4V9I; X-ray; 3.30 A; BG/DG=2-182.
DR PDB; 4V9R; X-ray; 3.00 A; BG/DG=1-182.
DR PDB; 4V9S; X-ray; 3.10 A; BG/DG=1-182.
DR PDB; 4W2E; X-ray; 2.90 A; G=1-182.
DR PDB; 4W2F; X-ray; 2.40 A; BG/DG=1-182.
DR PDB; 4W2G; X-ray; 2.55 A; BG/DG=1-182.
DR PDB; 4W2H; X-ray; 2.70 A; BG/DG=1-182.
DR PDB; 4W2I; X-ray; 2.70 A; BG/DG=1-182.
DR PDB; 4W4G; X-ray; 3.30 A; RG/YG=1-182.
DR PDB; 4WPO; X-ray; 2.80 A; AG/CG=1-182.
DR PDB; 4WQ1; X-ray; 3.10 A; 41/49=2-182.
DR PDB; 4WQF; X-ray; 2.80 A; AG/CG=1-182.
DR PDB; 4WQR; X-ray; 3.15 A; 41/49=1-182.
DR PDB; 4WQU; X-ray; 2.80 A; AG/CG=1-182.
DR PDB; 4WQY; X-ray; 2.80 A; AG/CG=1-182.
DR PDB; 4WR6; X-ray; 3.05 A; 41/49=1-182.
DR PDB; 4WRA; X-ray; 3.05 A; 41/49=1-182.
DR PDB; 4WRO; X-ray; 3.05 A; 41=1-182.
DR PDB; 4WSD; X-ray; 2.95 A; 41/49=1-182.
DR PDB; 4WSM; X-ray; 3.30 A; 41/49=1-182.
DR PDB; 4WT1; X-ray; 3.05 A; 41/49=1-182.
DR PDB; 4WT8; X-ray; 3.40 A; CE/DE=2-182.
DR PDB; 4WU1; X-ray; 3.20 A; 41/49=1-182.
DR PDB; 4WZD; X-ray; 3.10 A; 41/49=1-182.
DR PDB; 4WZO; X-ray; 3.30 A; 41/49=1-182.
DR PDB; 4Y4O; X-ray; 2.30 A; 1G/2G=1-182.
DR PDB; 4Y4P; X-ray; 2.50 A; 1G/2G=1-182.
DR PDB; 4YPB; X-ray; 3.40 A; RG/YG=1-182.
DR PDB; 4YZV; X-ray; 3.10 A; RG/YG=1-182.
DR PDB; 4Z3S; X-ray; 2.65 A; 1G/2G=1-182.
DR PDB; 4Z8C; X-ray; 2.90 A; 1G/2G=1-182.
DR PDB; 4ZER; X-ray; 3.10 A; 1G/2G=2-182.
DR PDB; 4ZSN; X-ray; 3.60 A; RG/YG=1-182.
DR PDB; 5A9Z; EM; 4.70 A; AG=1-182.
DR PDB; 5AA0; EM; 5.00 A; AG=1-182.
DR PDB; 5CZP; X-ray; 3.30 A; RG/YG=1-182.
DR PDB; 5D8B; X-ray; 3.63 A; D/ZA=6-182.
DR PDB; 5DFE; X-ray; 3.10 A; RG/YG=1-182.
DR PDB; 5DOX; X-ray; 3.10 A; 1G/2G=1-182.
DR PDB; 5DOY; X-ray; 2.60 A; 1G/2G=1-182.
DR PDB; 5E7K; X-ray; 3.20 A; 41/49=1-182.
DR PDB; 5E81; X-ray; 2.95 A; 41/49=1-182.
DR PDB; 5EL4; X-ray; 3.15 A; 41/49=1-182.
DR PDB; 5EL5; X-ray; 3.15 A; 41/49=1-182.
DR PDB; 5EL6; X-ray; 3.10 A; 41/49=1-182.
DR PDB; 5EL7; X-ray; 3.15 A; 41/49=1-182.
DR PDB; 5F8K; X-ray; 2.80 A; 1G/2G=2-182.
DR PDB; 5FDU; X-ray; 2.90 A; 1G/2G=2-182.
DR PDB; 5FDV; X-ray; 2.80 A; 1G/2G=2-182.
DR PDB; 5HAU; X-ray; 3.00 A; 1G/2G=1-182.
DR PDB; 5HCP; X-ray; 2.89 A; 1G/2G=1-182.
DR PDB; 5HCQ; X-ray; 2.80 A; 1G/2G=1-182.
DR PDB; 5HCR; X-ray; 2.80 A; 1G/2G=1-182.
DR PDB; 5HD1; X-ray; 2.70 A; 1G/2G=1-182.
DR PDB; 5IB7; X-ray; 2.99 A; 41/49=1-182.
DR PDB; 5IB8; X-ray; 3.13 A; 41/49=1-182.
DR PDB; 5IBB; X-ray; 2.96 A; 41/49=1-182.
DR PDB; 5IMQ; EM; 3.80 A; d=1-182.
DR PDB; 5IMR; EM; -; d=1-182.
DR PDB; 5J30; X-ray; 3.20 A; RG/YG=1-182.
DR PDB; 5J3C; X-ray; 3.04 A; RG/YG=1-182.
DR PDB; 5J4B; X-ray; 2.60 A; 1G/2G=1-182.
DR PDB; 5J4C; X-ray; 2.80 A; 1G/2G=1-182.
DR PDB; 5J8B; X-ray; 2.60 A; G=1-182.
DR PDB; 5NDJ; X-ray; 3.15 A; 41/49=1-182.
DR PDB; 5NDK; X-ray; 2.95 A; 41/49=1-182.
DR PDB; 5OT7; EM; 3.80 A; j=4-182.
DR PDB; 5UQ7; EM; 3.50 A; G=2-182.
DR PDB; 5UQ8; EM; 3.20 A; G=2-182.
DR PDB; 5VP2; X-ray; 2.80 A; 1G/2G=1-182.
DR PDB; 5VPO; X-ray; 3.34 A; RG/YG=1-182.
DR PDB; 5VPP; X-ray; 3.90 A; RG/YG=1-182.
DR PDB; 5W4K; X-ray; 2.70 A; 1G/2G=1-182.
DR PDB; 5WIS; X-ray; 2.70 A; 1G/2G=1-182.
DR PDB; 5WIT; X-ray; 2.60 A; 1G/2G=1-182.
DR PDB; 5ZLU; EM; 3.60 A; c=1-182.
DR PDB; 6BUW; X-ray; 3.50 A; RG/YG=1-182.
DR PDB; 6BZ6; X-ray; 3.18 A; RG/YG=1-182.
DR PDB; 6BZ7; X-ray; 3.68 A; RG/YG=1-182.
DR PDB; 6BZ8; X-ray; 3.74 A; RG/YG=1-182.
DR PDB; 6C5L; X-ray; 3.20 A; BG/DG=1-182.
DR PDB; 6CAE; X-ray; 2.60 A; 1G/2G=1-182.
DR PDB; 6CFJ; X-ray; 2.80 A; 1G/2G=1-182.
DR PDB; 6CFK; X-ray; 2.70 A; 1G/2G=1-182.
DR PDB; 6CFL; X-ray; 2.60 A; 1G/2G=1-182.
DR PDB; 6CZR; X-ray; 3.14 A; 1G/2G=2-182.
DR PDB; 6FKR; X-ray; 3.20 A; 1G/2G=2-182.
DR PDB; 6GSJ; X-ray; 2.96 A; 41/49=1-182.
DR PDB; 6GSK; X-ray; 3.36 A; 41/49=1-182.
DR PDB; 6GSL; X-ray; 3.16 A; 41/49=1-182.
DR PDB; 6GZQ; EM; 3.28 A; F1=2-182.
DR PDB; 6GZX; EM; 4.57 A; F1/F2=2-182.
DR PDB; 6GZZ; EM; 4.13 A; F1/F2=2-182.
DR PDB; 6ND5; X-ray; 2.60 A; 1G/2G=1-182.
DR PDB; 6ND6; X-ray; 2.85 A; 1G/2G=1-182.
DR PDB; 6NDK; X-ray; 3.64 A; RG/YG=1-182.
DR PDB; 6NSH; X-ray; 3.40 A; RG/YG=1-182.
DR PDB; 6NTA; X-ray; 3.10 A; RG/YG=1-182.
DR PDB; 6NUO; X-ray; 3.20 A; RG/YG=1-182.
DR PDB; 6NWY; X-ray; 3.50 A; RG/YG=1-182.
DR PDB; 6O3M; X-ray; 3.97 A; RG/YG=1-182.
DR PDB; 6O97; X-ray; 2.75 A; 1G/2G=1-182.
DR PDB; 6OF1; X-ray; 2.80 A; 1G/2G=1-182.
DR PDB; 6OF6; X-ray; 3.20 A; RG/YG=1-182.
DR PDB; 6OJ2; X-ray; 3.20 A; RG/YG=1-182.
DR PDB; 6OPE; X-ray; 3.10 A; RG/YG=1-182.
DR PDB; 6ORD; X-ray; 3.10 A; RG/YG=1-182.
DR PDB; 6OSI; X-ray; 4.14 A; RG/YG=1-182.
DR PDB; 6OTR; X-ray; 3.12 A; RG/YG=1-182.
DR PDB; 6OXA; X-ray; 3.25 A; RG/YG=1-182.
DR PDB; 6OXI; X-ray; 3.50 A; RG/YG=1-182.
DR PDB; 6Q95; EM; 3.70 A; E=2-182.
DR PDB; 6QNQ; X-ray; 3.50 A; 41/49=1-182.
DR PDB; 6QNR; X-ray; 3.10 A; 41/49=1-182.
DR PDB; 6UCQ; X-ray; 3.50 A; 1G/2G=1-182.
DR PDB; 6UO1; X-ray; 2.95 A; 1G/2G=1-182.
DR PDB; 6XHV; X-ray; 2.40 A; 1G/2G=1-182.
DR PDB; 6XHW; X-ray; 2.50 A; 1G/2G=1-182.
DR PDB; 6XHX; X-ray; 2.55 A; 1G/2G=1-182.
DR PDB; 6XHY; X-ray; 2.60 A; 1G/2G=1-182.
DR PDB; 6XQD; X-ray; 2.80 A; 1G/2G=1-182.
DR PDB; 6XQE; X-ray; 3.00 A; 1G/2G=1-182.
DR PDB; 7JQL; X-ray; 3.00 A; 1G/2G=1-182.
DR PDB; 7JQM; X-ray; 3.05 A; 1G/2G=1-182.
DR PDB; 7LH5; X-ray; 3.27 A; BG/DG=1-182.
DR PDB; 7MD7; X-ray; 2.80 A; 1G/2G=1-182.
DR PDB; 7RQ8; X-ray; 2.50 A; 1G/2G=1-182.
DR PDB; 7RQ9; X-ray; 2.60 A; 1G/2G=1-182.
DR PDB; 7RQA; X-ray; 2.40 A; 1G/2G=1-182.
DR PDB; 7RQB; X-ray; 2.45 A; 1G/2G=1-182.
DR PDB; 7RQC; X-ray; 2.50 A; 1G/2G=1-182.
DR PDB; 7RQD; X-ray; 2.50 A; 1G/2G=1-182.
DR PDB; 7RQE; X-ray; 2.40 A; 1G/2G=1-182.
DR PDBsum; 1VVJ; -.
DR PDBsum; 1VY4; -.
DR PDBsum; 1VY5; -.
DR PDBsum; 1VY6; -.
DR PDBsum; 1VY7; -.
DR PDBsum; 4L47; -.
DR PDBsum; 4L71; -.
DR PDBsum; 4LEL; -.
DR PDBsum; 4LFZ; -.
DR PDBsum; 4LNT; -.
DR PDBsum; 4LSK; -.
DR PDBsum; 4LT8; -.
DR PDBsum; 4P6F; -.
DR PDBsum; 4P70; -.
DR PDBsum; 4TUA; -.
DR PDBsum; 4TUB; -.
DR PDBsum; 4TUC; -.
DR PDBsum; 4TUD; -.
DR PDBsum; 4TUE; -.
DR PDBsum; 4V42; -.
DR PDBsum; 4V4P; -.
DR PDBsum; 4V4X; -.
DR PDBsum; 4V4Y; -.
DR PDBsum; 4V4Z; -.
DR PDBsum; 4V51; -.
DR PDBsum; 4V5A; -.
DR PDBsum; 4V5C; -.
DR PDBsum; 4V5D; -.
DR PDBsum; 4V5E; -.
DR PDBsum; 4V5F; -.
DR PDBsum; 4V5G; -.
DR PDBsum; 4V5J; -.
DR PDBsum; 4V5K; -.
DR PDBsum; 4V5L; -.
DR PDBsum; 4V5M; -.
DR PDBsum; 4V5N; -.
DR PDBsum; 4V5P; -.
DR PDBsum; 4V5Q; -.
DR PDBsum; 4V5R; -.
DR PDBsum; 4V5S; -.
DR PDBsum; 4V68; -.
DR PDBsum; 4V6A; -.
DR PDBsum; 4V6F; -.
DR PDBsum; 4V6G; -.
DR PDBsum; 4V7J; -.
DR PDBsum; 4V7K; -.
DR PDBsum; 4V7L; -.
DR PDBsum; 4V7M; -.
DR PDBsum; 4V7W; -.
DR PDBsum; 4V7X; -.
DR PDBsum; 4V7Y; -.
DR PDBsum; 4V7Z; -.
DR PDBsum; 4V87; -.
DR PDBsum; 4V8A; -.
DR PDBsum; 4V8B; -.
DR PDBsum; 4V8C; -.
DR PDBsum; 4V8D; -.
DR PDBsum; 4V8E; -.
DR PDBsum; 4V8F; -.
DR PDBsum; 4V8G; -.
DR PDBsum; 4V8H; -.
DR PDBsum; 4V8I; -.
DR PDBsum; 4V8J; -.
DR PDBsum; 4V8N; -.
DR PDBsum; 4V8O; -.
DR PDBsum; 4V8Q; -.
DR PDBsum; 4V8U; -.
DR PDBsum; 4V8X; -.
DR PDBsum; 4V90; -.
DR PDBsum; 4V95; -.
DR PDBsum; 4V97; -.
DR PDBsum; 4V9A; -.
DR PDBsum; 4V9B; -.
DR PDBsum; 4V9H; -.
DR PDBsum; 4V9I; -.
DR PDBsum; 4V9R; -.
DR PDBsum; 4V9S; -.
DR PDBsum; 4W2E; -.
DR PDBsum; 4W2F; -.
DR PDBsum; 4W2G; -.
DR PDBsum; 4W2H; -.
DR PDBsum; 4W2I; -.
DR PDBsum; 4W4G; -.
DR PDBsum; 4WPO; -.
DR PDBsum; 4WQ1; -.
DR PDBsum; 4WQF; -.
DR PDBsum; 4WQR; -.
DR PDBsum; 4WQU; -.
DR PDBsum; 4WQY; -.
DR PDBsum; 4WR6; -.
DR PDBsum; 4WRA; -.
DR PDBsum; 4WRO; -.
DR PDBsum; 4WSD; -.
DR PDBsum; 4WSM; -.
DR PDBsum; 4WT1; -.
DR PDBsum; 4WT8; -.
DR PDBsum; 4WU1; -.
DR PDBsum; 4WZD; -.
DR PDBsum; 4WZO; -.
DR PDBsum; 4Y4O; -.
DR PDBsum; 4Y4P; -.
DR PDBsum; 4YPB; -.
DR PDBsum; 4YZV; -.
DR PDBsum; 4Z3S; -.
DR PDBsum; 4Z8C; -.
DR PDBsum; 4ZER; -.
DR PDBsum; 4ZSN; -.
DR PDBsum; 5A9Z; -.
DR PDBsum; 5AA0; -.
DR PDBsum; 5CZP; -.
DR PDBsum; 5D8B; -.
DR PDBsum; 5DFE; -.
DR PDBsum; 5DOX; -.
DR PDBsum; 5DOY; -.
DR PDBsum; 5E7K; -.
DR PDBsum; 5E81; -.
DR PDBsum; 5EL4; -.
DR PDBsum; 5EL5; -.
DR PDBsum; 5EL6; -.
DR PDBsum; 5EL7; -.
DR PDBsum; 5F8K; -.
DR PDBsum; 5FDU; -.
DR PDBsum; 5FDV; -.
DR PDBsum; 5HAU; -.
DR PDBsum; 5HCP; -.
DR PDBsum; 5HCQ; -.
DR PDBsum; 5HCR; -.
DR PDBsum; 5HD1; -.
DR PDBsum; 5IB7; -.
DR PDBsum; 5IB8; -.
DR PDBsum; 5IBB; -.
DR PDBsum; 5IMQ; -.
DR PDBsum; 5IMR; -.
DR PDBsum; 5J30; -.
DR PDBsum; 5J3C; -.
DR PDBsum; 5J4B; -.
DR PDBsum; 5J4C; -.
DR PDBsum; 5J8B; -.
DR PDBsum; 5NDJ; -.
DR PDBsum; 5NDK; -.
DR PDBsum; 5OT7; -.
DR PDBsum; 5UQ7; -.
DR PDBsum; 5UQ8; -.
DR PDBsum; 5VP2; -.
DR PDBsum; 5VPO; -.
DR PDBsum; 5VPP; -.
DR PDBsum; 5W4K; -.
DR PDBsum; 5WIS; -.
DR PDBsum; 5WIT; -.
DR PDBsum; 5ZLU; -.
DR PDBsum; 6BUW; -.
DR PDBsum; 6BZ6; -.
DR PDBsum; 6BZ7; -.
DR PDBsum; 6BZ8; -.
DR PDBsum; 6C5L; -.
DR PDBsum; 6CAE; -.
DR PDBsum; 6CFJ; -.
DR PDBsum; 6CFK; -.
DR PDBsum; 6CFL; -.
DR PDBsum; 6CZR; -.
DR PDBsum; 6FKR; -.
DR PDBsum; 6GSJ; -.
DR PDBsum; 6GSK; -.
DR PDBsum; 6GSL; -.
DR PDBsum; 6GZQ; -.
DR PDBsum; 6GZX; -.
DR PDBsum; 6GZZ; -.
DR PDBsum; 6ND5; -.
DR PDBsum; 6ND6; -.
DR PDBsum; 6NDK; -.
DR PDBsum; 6NSH; -.
DR PDBsum; 6NTA; -.
DR PDBsum; 6NUO; -.
DR PDBsum; 6NWY; -.
DR PDBsum; 6O3M; -.
DR PDBsum; 6O97; -.
DR PDBsum; 6OF1; -.
DR PDBsum; 6OF6; -.
DR PDBsum; 6OJ2; -.
DR PDBsum; 6OPE; -.
DR PDBsum; 6ORD; -.
DR PDBsum; 6OSI; -.
DR PDBsum; 6OTR; -.
DR PDBsum; 6OXA; -.
DR PDBsum; 6OXI; -.
DR PDBsum; 6Q95; -.
DR PDBsum; 6QNQ; -.
DR PDBsum; 6QNR; -.
DR PDBsum; 6UCQ; -.
DR PDBsum; 6UO1; -.
DR PDBsum; 6XHV; -.
DR PDBsum; 6XHW; -.
DR PDBsum; 6XHX; -.
DR PDBsum; 6XHY; -.
DR PDBsum; 6XQD; -.
DR PDBsum; 6XQE; -.
DR PDBsum; 7JQL; -.
DR PDBsum; 7JQM; -.
DR PDBsum; 7LH5; -.
DR PDBsum; 7MD7; -.
DR PDBsum; 7RQ8; -.
DR PDBsum; 7RQ9; -.
DR PDBsum; 7RQA; -.
DR PDBsum; 7RQB; -.
DR PDBsum; 7RQC; -.
DR PDBsum; 7RQD; -.
DR PDBsum; 7RQE; -.
DR AlphaFoldDB; Q5SHQ0; -.
DR SMR; Q5SHQ0; -.
DR IntAct; Q5SHQ0; 8.
DR STRING; 300852.55773062; -.
DR EnsemblBacteria; BAD71503; BAD71503; BAD71503.
DR GeneID; 3169803; -.
DR KEGG; ttj:TTHA1680; -.
DR PATRIC; fig|300852.9.peg.1650; -.
DR eggNOG; COG0094; Bacteria.
DR HOGENOM; CLU_061015_2_1_0; -.
DR OMA; ERMYAFL; -.
DR PhylomeDB; Q5SHQ0; -.
DR EvolutionaryTrace; Q5SHQ0; -.
DR Proteomes; UP000000532; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1440.10; -; 1.
DR HAMAP; MF_01333_B; Ribosomal_L5_B; 1.
DR InterPro; IPR002132; Ribosomal_L5.
DR InterPro; IPR020930; Ribosomal_L5_bac-type.
DR InterPro; IPR031309; Ribosomal_L5_C.
DR InterPro; IPR020929; Ribosomal_L5_CS.
DR InterPro; IPR022803; Ribosomal_L5_dom_sf.
DR InterPro; IPR031310; Ribosomal_L5_N.
DR PANTHER; PTHR11994; PTHR11994; 1.
DR Pfam; PF00281; Ribosomal_L5; 1.
DR Pfam; PF00673; Ribosomal_L5_C; 1.
DR PIRSF; PIRSF002161; Ribosomal_L5; 1.
DR SUPFAM; SSF55282; SSF55282; 1.
DR PROSITE; PS00358; RIBOSOMAL_L5; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Reference proteome;
KW Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding;
KW tRNA-binding.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000269|PubMed:11154066, ECO:0000269|Ref.3,
FT ECO:0000269|Ref.4"
FT CHAIN 2..182
FT /note="50S ribosomal protein L5"
FT /id="PRO_0000125014"
FT HELIX 6..12
FT /evidence="ECO:0007829|PDB:4WT8"
FT HELIX 15..23
FT /evidence="ECO:0007829|PDB:4WT8"
FT TURN 28..30
FT /evidence="ECO:0007829|PDB:4WT8"
FT STRAND 34..40
FT /evidence="ECO:0007829|PDB:4WT8"
FT TURN 48..50
FT /evidence="ECO:0007829|PDB:4WT8"
FT HELIX 55..64
FT /evidence="ECO:0007829|PDB:4WT8"
FT STRAND 84..86
FT /evidence="ECO:0007829|PDB:4WT8"
FT STRAND 90..94
FT /evidence="ECO:0007829|PDB:4WT8"
FT HELIX 98..113
FT /evidence="ECO:0007829|PDB:4WT8"
FT STRAND 114..116
FT /evidence="ECO:0007829|PDB:4WT8"
FT STRAND 124..136
FT /evidence="ECO:0007829|PDB:4WT8"
FT STRAND 138..144
FT /evidence="ECO:0007829|PDB:4WT8"
FT TURN 146..148
FT /evidence="ECO:0007829|PDB:4WT8"
FT STRAND 155..162
FT /evidence="ECO:0007829|PDB:4WT8"
FT HELIX 166..175
FT /evidence="ECO:0007829|PDB:4WT8"
SQ SEQUENCE 182 AA; 21030 MW; 69A3361F6825929B CRC64;
MPLDVALKRK YYEEVRPELI RRFGYQNVWE VPRLEKVVIN QGLGEAKEDA RILEKAAQEL
ALITGQKPAV TRAKKSISNF KLRKGMPIGL RVTLRRDRMW IFLEKLLNVA LPRIRDFRGL
NPNSFDGRGN YNLGLREQLI FPEITYDMVD ALRGMDIAVV TTAETDEEAR ALLELLGFPF
RK
