RL6_BACTN
ID RL6_BACTN Reviewed; 189 AA.
AC Q8A491;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365};
GN Name=rplF {ECO:0000255|HAMAP-Rule:MF_01365}; OrderedLocusNames=BT_2712;
OS Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 /
OS CCUG 10774 / NCTC 10582 / VPI-5482 / E50).
OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=226186;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 /
RC VPI-5482 / E50;
RX PubMed=12663928; DOI=10.1126/science.1080029;
RA Xu J., Bjursell M.K., Himrod J., Deng S., Carmichael L.K., Chiang H.C.,
RA Hooper L.V., Gordon J.I.;
RT "A genomic view of the human-Bacteroides thetaiotaomicron symbiosis.";
RL Science 299:2074-2076(2003).
CC -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its
CC secondary structure. It is located near the subunit interface in the
CC base of the L7/L12 stalk, and near the tRNA binding site of the
CC peptidyltransferase center. {ECO:0000255|HAMAP-Rule:MF_01365}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01365}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC {ECO:0000255|HAMAP-Rule:MF_01365}.
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DR EMBL; AE015928; AAO77818.1; -; Genomic_DNA.
DR RefSeq; NP_811624.1; NC_004663.1.
DR RefSeq; WP_008765429.1; NZ_UYXG01000001.1.
DR AlphaFoldDB; Q8A491; -.
DR SMR; Q8A491; -.
DR STRING; 226186.BT_2712; -.
DR PaxDb; Q8A491; -.
DR PRIDE; Q8A491; -.
DR EnsemblBacteria; AAO77818; AAO77818; BT_2712.
DR GeneID; 45362428; -.
DR GeneID; 60923883; -.
DR KEGG; bth:BT_2712; -.
DR PATRIC; fig|226186.12.peg.2755; -.
DR eggNOG; COG0097; Bacteria.
DR HOGENOM; CLU_065464_1_2_10; -.
DR InParanoid; Q8A491; -.
DR OMA; KPDPYKG; -.
DR Proteomes; UP000001414; Chromosome.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR Gene3D; 3.90.930.12; -; 2.
DR HAMAP; MF_01365_B; Ribosomal_L6_B; 1.
DR InterPro; IPR000702; Ribosomal_L6.
DR InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR InterPro; IPR019906; Ribosomal_L6_bac-type.
DR InterPro; IPR002358; Ribosomal_L6_CS.
DR PANTHER; PTHR11655; PTHR11655; 1.
DR PANTHER; PTHR11655:SF14; PTHR11655:SF14; 1.
DR Pfam; PF00347; Ribosomal_L6; 2.
DR PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR PRINTS; PR00059; RIBOSOMALL6.
DR SUPFAM; SSF56053; SSF56053; 2.
DR TIGRFAMs; TIGR03654; L6_bact; 1.
DR PROSITE; PS00525; RIBOSOMAL_L6_1; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..189
FT /note="50S ribosomal protein L6"
FT /id="PRO_0000265215"
SQ SEQUENCE 189 AA; 20806 MW; E441022F071C32D9 CRC64;
MSRIGKLPIS IPAGVTVTLK DDVVTVKGPK GELSQYVNPA INVAIEDGHV TLTENEKEMI
DNPKQKHAFH GLYRSLVHNM VVGVSEGYKK ELELVGVGYR ASNQGNIIEL ALGYTHNIFI
QLPAEVKVET KSERNKNPLI ILESCDKQLL GQVCSKIRSF RKPEPYKGKG IKFVGEVIRR
KSGKSAGAK