RL6_CAEEL
ID RL6_CAEEL Reviewed; 217 AA.
AC P47991;
DT 01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1996, sequence version 1.
DT 03-AUG-2022, entry version 144.
DE RecName: Full=60S ribosomal protein L6;
GN Name=rpl-6; ORFNames=R151.3;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Component of the large ribosomal subunit.
CC {ECO:0000250|UniProtKB:Q02878}.
CC -!- SUBUNIT: Component of the large ribosomal subunit (By similarity). May
CC bind IPO9 with low affinity (By similarity).
CC {ECO:0000250|UniProtKB:P47911, ECO:0000250|UniProtKB:Q02878}.
CC -!- INTERACTION:
CC P47991; Q11184: let-756; NbExp=3; IntAct=EBI-316106, EBI-3843983;
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC {ECO:0000250|UniProtKB:Q02878}. Cytoplasm
CC {ECO:0000250|UniProtKB:Q02878}. Rough endoplasmic reticulum
CC {ECO:0000250|UniProtKB:Q2YGT9}. Note=Detected on cytosolic polysomes
CC (By similarity). Detected in ribosomes that are associated with the
CC rough endoplasmic reticulum (By similarity).
CC {ECO:0000250|UniProtKB:Q02878, ECO:0000250|UniProtKB:Q2YGT9}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL6 family.
CC {ECO:0000305}.
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DR EMBL; FO081317; CCD70755.1; -; Genomic_DNA.
DR PIR; T16762; T16762.
DR RefSeq; NP_498584.1; NM_066183.3.
DR AlphaFoldDB; P47991; -.
DR SMR; P47991; -.
DR BioGRID; 41227; 93.
DR DIP; DIP-26565N; -.
DR IntAct; P47991; 1.
DR STRING; 6239.R151.3.2; -.
DR iPTMnet; P47991; -.
DR EPD; P47991; -.
DR PaxDb; P47991; -.
DR PeptideAtlas; P47991; -.
DR EnsemblMetazoa; R151.3.1; R151.3.1; WBGene00004417.
DR GeneID; 176015; -.
DR KEGG; cel:CELE_R151.3; -.
DR UCSC; R151.3.1; c. elegans.
DR CTD; 176015; -.
DR WormBase; R151.3; CE00744; WBGene00004417; rpl-6.
DR eggNOG; KOG1694; Eukaryota.
DR GeneTree; ENSGT00390000003682; -.
DR HOGENOM; CLU_066767_0_0_1; -.
DR InParanoid; P47991; -.
DR OMA; GPYEVNG; -.
DR OrthoDB; 1227453at2759; -.
DR PhylomeDB; P47991; -.
DR Reactome; R-CEL-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-CEL-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR Reactome; R-CEL-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR Reactome; R-CEL-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-CEL-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR Reactome; R-CEL-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-CEL-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:P47991; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00004417; Expressed in larva and 4 other tissues.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005791; C:rough endoplasmic reticulum; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR GO; GO:0008340; P:determination of adult lifespan; IMP:WormBase.
DR GO; GO:0000027; P:ribosomal large subunit assembly; IBA:GO_Central.
DR CDD; cd13156; KOW_RPL6; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR InterPro; IPR000915; 60S_ribosomal_L6E.
DR InterPro; IPR041997; KOW_RPL6.
DR InterPro; IPR014722; Rib_L2_dom2.
DR InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR PANTHER; PTHR10715; PTHR10715; 1.
DR Pfam; PF01159; Ribosomal_L6e; 1.
DR SUPFAM; SSF50104; SSF50104; 1.
DR PROSITE; PS01170; RIBOSOMAL_L6E; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Endoplasmic reticulum; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein.
FT CHAIN 1..217
FT /note="60S ribosomal protein L6"
FT /id="PRO_0000171013"
SQ SEQUENCE 217 AA; 24313 MW; 5BA7FE473B1C239B CRC64;
MVGKRNLPVI SRNFDLSPGV LRFSASRLRL KKGEKKPKFT KDTSAKLPKL QRNGTKFALG
HSKTVTLRKT LTPGTVLIVL AGRHKGKRVV FLKQLPQSGL LLVTGPHKIN GFPLRRIGQA
FVIATSLKVN VSGVKIPEHI NDEYFKRKST AQKTGKNIFA SGKTEYTVSE QRKKDIKTVD
APILAAIKKH PEHKFLFGYL GTRFSLGKNQ YPHKMQF