RL6_HALSA
ID RL6_HALSA Reviewed; 178 AA.
AC Q9HPB8; P05968;
DT 10-MAY-2004, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 25-MAY-2022, entry version 108.
DE RecName: Full=50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365};
DE AltName: Full=HL10;
GN Name=rpl6 {ECO:0000255|HAMAP-Rule:MF_01365}; OrderedLocusNames=VNG_1709G;
OS Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
OS (Halobacterium halobium).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales;
OC Halobacteriaceae; Halobacterium.
OX NCBI_TaxID=64091;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700922 / JCM 11081 / NRC-1;
RX PubMed=11016950; DOI=10.1073/pnas.190337797;
RA Ng W.V., Kennedy S.P., Mahairas G.G., Berquist B., Pan M., Shukla H.D.,
RA Lasky S.R., Baliga N.S., Thorsson V., Sbrogna J., Swartzell S., Weir D.,
RA Hall J., Dahl T.A., Welti R., Goo Y.A., Leithauser B., Keller K., Cruz R.,
RA Danson M.J., Hough D.W., Maddocks D.G., Jablonski P.E., Krebs M.P.,
RA Angevine C.M., Dale H., Isenbarger T.A., Peck R.F., Pohlschroder M.,
RA Spudich J.L., Jung K.-H., Alam M., Freitas T., Hou S., Daniels C.J.,
RA Dennis P.P., Omer A.D., Ebhardt H., Lowe T.M., Liang P., Riley M., Hood L.,
RA DasSarma S.;
RT "Genome sequence of Halobacterium species NRC-1.";
RL Proc. Natl. Acad. Sci. U.S.A. 97:12176-12181(2000).
RN [2]
RP PROTEIN SEQUENCE OF 2-37.
RX PubMed=6467081; DOI=10.1139/o84-058;
RA Matheson A.T., Yaguchi M., Christensen P., Rollin C.F., Hasnain S.;
RT "Purification, properties, and N-terminal amino acid sequence of certain
RT 50S ribosomal subunit proteins from the archaebacterium Halobacterium
RT cutirubrum.";
RL Can. J. Biochem. Cell Biol. 62:426-433(1984).
CC -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its
CC secondary structure. It is located near the subunit interface in the
CC base of the L7/L12 stalk, and near the tRNA binding site of the
CC peptidyltransferase center. {ECO:0000255|HAMAP-Rule:MF_01365}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01365}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC {ECO:0000255|HAMAP-Rule:MF_01365}.
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DR EMBL; AE004437; AAG19952.1; -; Genomic_DNA.
DR PIR; D84323; D84323.
DR PIR; S08552; S08552.
DR RefSeq; WP_010903250.1; NC_002607.1.
DR AlphaFoldDB; Q9HPB8; -.
DR SMR; Q9HPB8; -.
DR STRING; 64091.VNG_1709G; -.
DR PaxDb; Q9HPB8; -.
DR EnsemblBacteria; AAG19952; AAG19952; VNG_1709G.
DR GeneID; 5954280; -.
DR GeneID; 62887102; -.
DR KEGG; hal:VNG_1709G; -.
DR PATRIC; fig|64091.14.peg.1304; -.
DR HOGENOM; CLU_065464_0_0_2; -.
DR InParanoid; Q9HPB8; -.
DR OMA; VFQDGIY; -.
DR OrthoDB; 80629at2157; -.
DR PhylomeDB; Q9HPB8; -.
DR Proteomes; UP000000554; Chromosome.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR Gene3D; 3.90.930.12; -; 2.
DR HAMAP; MF_01365_A; Ribosomal_L6_A; 1.
DR InterPro; IPR000702; Ribosomal_L6.
DR InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR InterPro; IPR002359; Ribosomal_L6_CS2.
DR InterPro; IPR019907; Ribosomal_L6P_arc.
DR PANTHER; PTHR11655; PTHR11655; 1.
DR Pfam; PF00347; Ribosomal_L6; 2.
DR PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR SUPFAM; SSF56053; SSF56053; 2.
DR TIGRFAMs; TIGR03653; uL6_arch; 1.
DR PROSITE; PS00700; RIBOSOMAL_L6_2; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000269|PubMed:6467081"
FT CHAIN 2..178
FT /note="50S ribosomal protein L6"
FT /id="PRO_0000131084"
FT CONFLICT 36
FT /note="Y -> Q (in Ref. 2; AA sequence)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 178 AA; 19607 MW; 27CA9DFAF7214B85 CRC64;
MARVEIEIPD DVTAEVDHLD LTVEGPEGSV TRRLWYPDVD VSVEDDAVVV ASEVDDAKTD
STVGTFESHV ANMFHGVSEG WEYKLEVHYS HFPMQVDVEG EEVVIQNFLG EKAARRTQIR
GDTDVVVDDE EVTLSGPSIE DVGQTAADIE QLTRVTDKDT RVFQDGVYIV EKPAKGGA
