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RL6_METBU
ID   RL6_METBU               Reviewed;         177 AA.
AC   Q12ZT5;
DT   28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT   22-AUG-2006, sequence version 1.
DT   25-MAY-2022, entry version 77.
DE   RecName: Full=50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365};
GN   Name=rpl6 {ECO:0000255|HAMAP-Rule:MF_01365}; OrderedLocusNames=Mbur_0017;
OS   Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /
OS   ACE-M).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanosarcinales; Methanosarcinaceae; Methanococcoides.
OX   NCBI_TaxID=259564;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 6242 / NBRC 107633 / OCM 468 / ACE-M;
RX   PubMed=19404327; DOI=10.1038/ismej.2009.45;
RA   Allen M.A., Lauro F.M., Williams T.J., Burg D., Siddiqui K.S.,
RA   De Francisci D., Chong K.W., Pilak O., Chew H.H., De Maere M.Z., Ting L.,
RA   Katrib M., Ng C., Sowers K.R., Galperin M.Y., Anderson I.J., Ivanova N.,
RA   Dalin E., Martinez M., Lapidus A., Hauser L., Land M., Thomas T.,
RA   Cavicchioli R.;
RT   "The genome sequence of the psychrophilic archaeon, Methanococcoides
RT   burtonii: the role of genome evolution in cold adaptation.";
RL   ISME J. 3:1012-1035(2009).
CC   -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its
CC       secondary structure. It is located near the subunit interface in the
CC       base of the L7/L12 stalk, and near the tRNA binding site of the
CC       peptidyltransferase center. {ECO:0000255|HAMAP-Rule:MF_01365}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC       Rule:MF_01365}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC       {ECO:0000255|HAMAP-Rule:MF_01365}.
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DR   EMBL; CP000300; ABE51041.1; -; Genomic_DNA.
DR   RefSeq; WP_011498205.1; NC_007955.1.
DR   AlphaFoldDB; Q12ZT5; -.
DR   SMR; Q12ZT5; -.
DR   STRING; 259564.Mbur_0017; -.
DR   PRIDE; Q12ZT5; -.
DR   EnsemblBacteria; ABE51041; ABE51041; Mbur_0017.
DR   GeneID; 3996917; -.
DR   KEGG; mbu:Mbur_0017; -.
DR   HOGENOM; CLU_065464_0_0_2; -.
DR   OMA; VFQDGIY; -.
DR   OrthoDB; 80629at2157; -.
DR   Proteomes; UP000001979; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.90.930.12; -; 2.
DR   HAMAP; MF_01365_A; Ribosomal_L6_A; 1.
DR   InterPro; IPR000702; Ribosomal_L6.
DR   InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR   InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR   InterPro; IPR002359; Ribosomal_L6_CS2.
DR   InterPro; IPR019907; Ribosomal_L6P_arc.
DR   PANTHER; PTHR11655; PTHR11655; 1.
DR   Pfam; PF00347; Ribosomal_L6; 2.
DR   PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR   SUPFAM; SSF56053; SSF56053; 2.
DR   TIGRFAMs; TIGR03653; uL6_arch; 1.
DR   PROSITE; PS00700; RIBOSOMAL_L6_2; 1.
PE   3: Inferred from homology;
KW   Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW   rRNA-binding.
FT   CHAIN           1..177
FT                   /note="50S ribosomal protein L6"
FT                   /id="PRO_0000260984"
SQ   SEQUENCE   177 AA;  19684 MW;  1293A40CF3F4BCCF CRC64;
     MAKEIKKIIS IPEGVTVTFE KNVLSASGPK GTNTRFLWYP GVNIEVNGSE IIVDSASSRK
     KQKAMVGTYT SHITNMMKGV VDGFEYHMKV VYSHFPMQIK VNGKKFVINN FLGEKKPRVS
     NILGETSVKA SGDEVIVSGI NKEDVGQTAA NIEQKTKIKR FDPRVFQDGI YIVDKRV
 
 
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