RL6_METMA
ID RL6_METMA Reviewed; 176 AA.
AC Q8PV34;
DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 25-MAY-2022, entry version 117.
DE RecName: Full=50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365};
GN Name=rpl6 {ECO:0000255|HAMAP-Rule:MF_01365}; OrderedLocusNames=MM_2140;
OS Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
OS 11833 / OCM 88) (Methanosarcina frisia).
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanosarcinales; Methanosarcinaceae; Methanosarcina.
OX NCBI_TaxID=192952;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88;
RX PubMed=12125824;
RA Deppenmeier U., Johann A., Hartsch T., Merkl R., Schmitz R.A.,
RA Martinez-Arias R., Henne A., Wiezer A., Baeumer S., Jacobi C.,
RA Brueggemann H., Lienard T., Christmann A., Boemecke M., Steckel S.,
RA Bhattacharyya A., Lykidis A., Overbeek R., Klenk H.-P., Gunsalus R.P.,
RA Fritz H.-J., Gottschalk G.;
RT "The genome of Methanosarcina mazei: evidence for lateral gene transfer
RT between Bacteria and Archaea.";
RL J. Mol. Microbiol. Biotechnol. 4:453-461(2002).
CC -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its
CC secondary structure. It is located near the subunit interface in the
CC base of the L7/L12 stalk, and near the tRNA binding site of the
CC peptidyltransferase center. {ECO:0000255|HAMAP-Rule:MF_01365}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01365}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC {ECO:0000255|HAMAP-Rule:MF_01365}.
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DR EMBL; AE008384; AAM31836.1; -; Genomic_DNA.
DR RefSeq; WP_011034071.1; NC_003901.1.
DR AlphaFoldDB; Q8PV34; -.
DR SMR; Q8PV34; -.
DR STRING; 192952.MM_2140; -.
DR EnsemblBacteria; AAM31836; AAM31836; MM_2140.
DR GeneID; 44088226; -.
DR GeneID; 66136375; -.
DR KEGG; mma:MM_2140; -.
DR PATRIC; fig|192952.21.peg.2454; -.
DR eggNOG; arCOG04090; Archaea.
DR HOGENOM; CLU_065464_0_0_2; -.
DR OMA; VFQDGIY; -.
DR Proteomes; UP000000595; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.90.930.12; -; 2.
DR HAMAP; MF_01365_A; Ribosomal_L6_A; 1.
DR InterPro; IPR000702; Ribosomal_L6.
DR InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR InterPro; IPR002359; Ribosomal_L6_CS2.
DR InterPro; IPR019907; Ribosomal_L6P_arc.
DR PANTHER; PTHR11655; PTHR11655; 1.
DR Pfam; PF00347; Ribosomal_L6; 2.
DR PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR SUPFAM; SSF56053; SSF56053; 2.
DR TIGRFAMs; TIGR03653; uL6_arch; 1.
DR PROSITE; PS00700; RIBOSOMAL_L6_2; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..176
FT /note="50S ribosomal protein L6"
FT /id="PRO_0000260989"
SQ SEQUENCE 176 AA; 19480 MW; 6FC5FE2E9EF3F6AC CRC64;
MVKEIARTIE IPEGVSVSLS QDVFTAKGPK GTVERTFWYP GIKIEVREGE VVVDAESSRK
EQKAMVGTFA SHLKNLIIGV SEGFECKMNI VYAHFPMQVK VEGKTLVIGN FLGEKKPRIA
KILGETKVKV SGNEIVVSGI NKEDVGQTAA NIEQKTKIKR FDPRIFQDGI YIVQKA