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RL6_METMA
ID   RL6_METMA               Reviewed;         176 AA.
AC   Q8PV34;
DT   28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2002, sequence version 1.
DT   25-MAY-2022, entry version 117.
DE   RecName: Full=50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365};
GN   Name=rpl6 {ECO:0000255|HAMAP-Rule:MF_01365}; OrderedLocusNames=MM_2140;
OS   Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
OS   11833 / OCM 88) (Methanosarcina frisia).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanosarcinales; Methanosarcinaceae; Methanosarcina.
OX   NCBI_TaxID=192952;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88;
RX   PubMed=12125824;
RA   Deppenmeier U., Johann A., Hartsch T., Merkl R., Schmitz R.A.,
RA   Martinez-Arias R., Henne A., Wiezer A., Baeumer S., Jacobi C.,
RA   Brueggemann H., Lienard T., Christmann A., Boemecke M., Steckel S.,
RA   Bhattacharyya A., Lykidis A., Overbeek R., Klenk H.-P., Gunsalus R.P.,
RA   Fritz H.-J., Gottschalk G.;
RT   "The genome of Methanosarcina mazei: evidence for lateral gene transfer
RT   between Bacteria and Archaea.";
RL   J. Mol. Microbiol. Biotechnol. 4:453-461(2002).
CC   -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its
CC       secondary structure. It is located near the subunit interface in the
CC       base of the L7/L12 stalk, and near the tRNA binding site of the
CC       peptidyltransferase center. {ECO:0000255|HAMAP-Rule:MF_01365}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC       Rule:MF_01365}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC       {ECO:0000255|HAMAP-Rule:MF_01365}.
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DR   EMBL; AE008384; AAM31836.1; -; Genomic_DNA.
DR   RefSeq; WP_011034071.1; NC_003901.1.
DR   AlphaFoldDB; Q8PV34; -.
DR   SMR; Q8PV34; -.
DR   STRING; 192952.MM_2140; -.
DR   EnsemblBacteria; AAM31836; AAM31836; MM_2140.
DR   GeneID; 44088226; -.
DR   GeneID; 66136375; -.
DR   KEGG; mma:MM_2140; -.
DR   PATRIC; fig|192952.21.peg.2454; -.
DR   eggNOG; arCOG04090; Archaea.
DR   HOGENOM; CLU_065464_0_0_2; -.
DR   OMA; VFQDGIY; -.
DR   Proteomes; UP000000595; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.90.930.12; -; 2.
DR   HAMAP; MF_01365_A; Ribosomal_L6_A; 1.
DR   InterPro; IPR000702; Ribosomal_L6.
DR   InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR   InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR   InterPro; IPR002359; Ribosomal_L6_CS2.
DR   InterPro; IPR019907; Ribosomal_L6P_arc.
DR   PANTHER; PTHR11655; PTHR11655; 1.
DR   Pfam; PF00347; Ribosomal_L6; 2.
DR   PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR   SUPFAM; SSF56053; SSF56053; 2.
DR   TIGRFAMs; TIGR03653; uL6_arch; 1.
DR   PROSITE; PS00700; RIBOSOMAL_L6_2; 1.
PE   3: Inferred from homology;
KW   Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW   rRNA-binding.
FT   CHAIN           1..176
FT                   /note="50S ribosomal protein L6"
FT                   /id="PRO_0000260989"
SQ   SEQUENCE   176 AA;  19480 MW;  6FC5FE2E9EF3F6AC CRC64;
     MVKEIARTIE IPEGVSVSLS QDVFTAKGPK GTVERTFWYP GIKIEVREGE VVVDAESSRK
     EQKAMVGTFA SHLKNLIIGV SEGFECKMNI VYAHFPMQVK VEGKTLVIGN FLGEKKPRIA
     KILGETKVKV SGNEIVVSGI NKEDVGQTAA NIEQKTKIKR FDPRIFQDGI YIVQKA
 
 
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