RL6_MYCCT
ID RL6_MYCCT Reviewed; 180 AA.
AC P04448; Q2SRG8; Q49075;
DT 13-AUG-1987, integrated into UniProtKB/Swiss-Prot.
DT 13-AUG-1987, sequence version 1.
DT 25-MAY-2022, entry version 123.
DE RecName: Full=50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365};
GN Name=rplF {ECO:0000255|HAMAP-Rule:MF_01365}; OrderedLocusNames=MCAP_0681;
OS Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343
OS / NCTC 10154).
OC Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.
OX NCBI_TaxID=340047;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=3481422; DOI=10.1007/bf00325700;
RA Ohkubo S., Muto A., Kawauchi Y., Yamao F., Osawa S.;
RT "The ribosomal protein gene cluster of Mycoplasma capricolum.";
RL Mol. Gen. Genet. 210:314-322(1987).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=6095194; DOI=10.1093/nar/12.21.8209;
RA Muto A., Kawauchi Y., Yamao F., Osawa S.;
RT "Preferential use of A- and U-rich codons for Mycoplasma capricolum
RT ribosomal proteins S8 and L6.";
RL Nucleic Acids Res. 12:8209-8217(1984).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=California kid / ATCC 27343 / NCTC 10154;
RA Glass J.I., Lartigue C., Pfannkoch C., Baden-Tillson H., Smith H.O.,
RA Venter J.C., Roske K., Wise K.S., Calcutt M.J., Nelson W.C., Nierman W.C.;
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 76-127.
RX PubMed=7476192; DOI=10.1111/j.1365-2958.1995.tb02321.x;
RA Bork P., Ouzounis C., Casari G., Schneider R., Sander C., Dolan M.,
RA Gilbert W., Gillevet P.M.;
RT "Exploring the Mycoplasma capricolum genome: a minimal cell reveals its
RT physiology.";
RL Mol. Microbiol. 16:955-967(1995).
CC -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its
CC secondary structure. It is located near the subunit interface in the
CC base of the L7/L12 stalk, and near the tRNA binding site of the
CC peptidyltransferase center. {ECO:0000255|HAMAP-Rule:MF_01365}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01365}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC {ECO:0000255|HAMAP-Rule:MF_01365}.
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DR EMBL; X06414; CAA29719.1; -; Genomic_DNA.
DR EMBL; X01121; CAA25588.1; -; Genomic_DNA.
DR EMBL; CP000123; ABC01554.1; -; Genomic_DNA.
DR EMBL; Z33291; CAA83827.1; -; Genomic_DNA.
DR PIR; S02846; R5YM6.
DR RefSeq; WP_011387536.1; NC_007633.1.
DR AlphaFoldDB; P04448; -.
DR SMR; P04448; -.
DR EnsemblBacteria; ABC01554; ABC01554; MCAP_0681.
DR GeneID; 23778365; -.
DR KEGG; mcp:MCAP_0681; -.
DR HOGENOM; CLU_065464_1_2_14; -.
DR OMA; KPDPYKG; -.
DR OrthoDB; 1398618at2; -.
DR PhylomeDB; P04448; -.
DR Proteomes; UP000001928; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.90.930.12; -; 2.
DR HAMAP; MF_01365_B; Ribosomal_L6_B; 1.
DR InterPro; IPR000702; Ribosomal_L6.
DR InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR InterPro; IPR019906; Ribosomal_L6_bac-type.
DR InterPro; IPR002358; Ribosomal_L6_CS.
DR PANTHER; PTHR11655; PTHR11655; 1.
DR PANTHER; PTHR11655:SF14; PTHR11655:SF14; 1.
DR Pfam; PF00347; Ribosomal_L6; 2.
DR PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR PRINTS; PR00059; RIBOSOMALL6.
DR SUPFAM; SSF56053; SSF56053; 2.
DR TIGRFAMs; TIGR03654; L6_bact; 1.
DR PROSITE; PS00525; RIBOSOMAL_L6_1; 1.
PE 3: Inferred from homology;
KW Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1..180
FT /note="50S ribosomal protein L6"
FT /id="PRO_0000131057"
SQ SEQUENCE 180 AA; 19647 MW; 29E0463E80AE71DF CRC64;
MSRIGNRLLQ IPNGVEVKIA ENNLVTITGS KGTLSKQFSP LIKIEVEENK LITKRLNEQK
HTKQLHGTTN SLLQGMLTGV SEGFKKELQI TGVGYKAAVN GSKLNLSLGY SHPVEFEIPD
GVVIQAVKPT ELAITGIDKQ LVGQVAANIR AYRKPEPYKG KGIKYKNETI IRKEGKAAGK