RL6_SULAC
ID RL6_SULAC Reviewed; 189 AA.
AC O05637; Q4JB56;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1997, sequence version 1.
DT 25-MAY-2022, entry version 100.
DE RecName: Full=50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365};
GN Name=rpl6 {ECO:0000255|HAMAP-Rule:MF_01365}; OrderedLocusNames=Saci_0581;
OS Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC
OS 15157 / NCIMB 11770).
OC Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae;
OC Sulfolobus.
OX NCBI_TaxID=330779;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770;
RX PubMed=10381320; DOI=10.1006/mpev.1998.0607;
RA Yang D., Kusser I., Koepke A.K., Koop B.F., Matheson A.T.;
RT "The structure and evolution of the ribosomal proteins encoded in the spc
RT operon of the archaeon (Crenarchaeota) Sulfolobus acidocaldarius.";
RL Mol. Phylogenet. Evol. 12:177-185(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770;
RX PubMed=15995215; DOI=10.1128/jb.187.14.4992-4999.2005;
RA Chen L., Bruegger K., Skovgaard M., Redder P., She Q., Torarinsson E.,
RA Greve B., Awayez M., Zibat A., Klenk H.-P., Garrett R.A.;
RT "The genome of Sulfolobus acidocaldarius, a model organism of the
RT Crenarchaeota.";
RL J. Bacteriol. 187:4992-4999(2005).
CC -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its
CC secondary structure. It is located near the subunit interface in the
CC base of the L7/L12 stalk, and near the tRNA binding site of the
CC peptidyltransferase center. {ECO:0000255|HAMAP-Rule:MF_01365}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01365}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC {ECO:0000255|HAMAP-Rule:MF_01365}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAY79973.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; Y07778; CAA69093.1; -; Genomic_DNA.
DR EMBL; CP000077; AAY79973.1; ALT_INIT; Genomic_DNA.
DR AlphaFoldDB; O05637; -.
DR SMR; O05637; -.
DR STRING; 330779.Saci_0581; -.
DR EnsemblBacteria; AAY79973; AAY79973; Saci_0581.
DR KEGG; sai:Saci_0581; -.
DR PATRIC; fig|330779.12.peg.560; -.
DR eggNOG; arCOG04090; Archaea.
DR HOGENOM; CLU_065464_0_0_2; -.
DR Proteomes; UP000001018; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.90.930.12; -; 2.
DR HAMAP; MF_01365_A; Ribosomal_L6_A; 1.
DR InterPro; IPR000702; Ribosomal_L6.
DR InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR InterPro; IPR002359; Ribosomal_L6_CS2.
DR InterPro; IPR019907; Ribosomal_L6P_arc.
DR PANTHER; PTHR11655; PTHR11655; 1.
DR Pfam; PF00347; Ribosomal_L6; 2.
DR PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR SUPFAM; SSF56053; SSF56053; 2.
DR TIGRFAMs; TIGR03653; uL6_arch; 1.
DR PROSITE; PS00700; RIBOSOMAL_L6_2; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..189
FT /note="50S ribosomal protein L6"
FT /id="PRO_0000131090"
SQ SEQUENCE 189 AA; 21209 MW; 0A62AC7C6E2997D6 CRC64;
MKCLKAAYIR EEIQIPDKVK VSLENNVLKV KGPKGEVIKD FSYAKGIRIQ LNEGKIILET
TFADRRKKAL LYSIIAHIKN MITGTINGYR YYLKVISTHF PISVKVSGDE VQVSNLIGEK
NIRRAKILPG VKVTVKGEDI VVEGSDIYNV AQTAANIESS TKIVGYDRRI FSDGIYIYKK
EVIGLEQSD
