RL6_SYNP6
ID RL6_SYNP6 Reviewed; 179 AA.
AC O24703;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 25-MAY-2022, entry version 110.
DE RecName: Full=50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365};
GN Name=rplF {ECO:0000255|HAMAP-Rule:MF_01365};
GN Synonyms=rpl6 {ECO:0000255|HAMAP-Rule:MF_01365};
GN OrderedLocusNames=syc1879_d;
OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis
OS nidulans).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus.
OX NCBI_TaxID=269084;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=9300823; DOI=10.1016/s0378-1119(97)00169-8;
RA Sugita M., Sugishita H., Fujishiro T., Tsuboi M., Sugita C., Endo T.,
RA Sugiura M.;
RT "Organization of a large gene cluster encoding ribosomal proteins in the
RT cyanobacterium Synechococcus sp. strain PCC 6301: comparison of gene
RT clusters among cyanobacteria, eubacteria and chloroplast genomes.";
RL Gene 195:73-79(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 27144 / PCC 6301 / SAUG 1402/1;
RX PubMed=17211581; DOI=10.1007/s11120-006-9122-4;
RA Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M.,
RA Kanehisa M., Omata T., Sugiura M., Sugita M.;
RT "Complete nucleotide sequence of the freshwater unicellular cyanobacterium
RT Synechococcus elongatus PCC 6301 chromosome: gene content and
RT organization.";
RL Photosyn. Res. 93:55-67(2007).
CC -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its
CC secondary structure. It is located near the subunit interface in the
CC base of the L7/L12 stalk, and near the tRNA binding site of the
CC peptidyltransferase center. {ECO:0000255|HAMAP-Rule:MF_01365}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01365}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC {ECO:0000255|HAMAP-Rule:MF_01365}.
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DR EMBL; AB000111; BAA22463.1; -; Genomic_DNA.
DR EMBL; AP008231; BAD80069.1; -; Genomic_DNA.
DR RefSeq; WP_011244189.1; NC_006576.1.
DR AlphaFoldDB; O24703; -.
DR SMR; O24703; -.
DR STRING; 269084.syc1879_d; -.
DR EnsemblBacteria; BAD80069; BAD80069; syc1879_d.
DR KEGG; syc:syc1879_d; -.
DR eggNOG; COG0097; Bacteria.
DR OMA; KPDPYKG; -.
DR Proteomes; UP000001175; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.90.930.12; -; 2.
DR HAMAP; MF_01365_B; Ribosomal_L6_B; 1.
DR InterPro; IPR000702; Ribosomal_L6.
DR InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR InterPro; IPR019906; Ribosomal_L6_bac-type.
DR InterPro; IPR002358; Ribosomal_L6_CS.
DR PANTHER; PTHR11655; PTHR11655; 1.
DR PANTHER; PTHR11655:SF14; PTHR11655:SF14; 1.
DR Pfam; PF00347; Ribosomal_L6; 2.
DR PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR PRINTS; PR00059; RIBOSOMALL6.
DR SUPFAM; SSF56053; SSF56053; 2.
DR TIGRFAMs; TIGR03654; L6_bact; 1.
DR PROSITE; PS00525; RIBOSOMAL_L6_1; 1.
PE 3: Inferred from homology;
KW Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1..179
FT /note="50S ribosomal protein L6"
FT /id="PRO_0000131069"
SQ SEQUENCE 179 AA; 19198 MW; EFB0C8235E0AC995 CRC64;
MSRIGKRPIP IPAKVSVAID GRLVSVKGPK GELSRELPSG VVVTQEDGNI IVSRADESRL
ARQRHGLSRT LVANLVEGVD SGFQKRLEII GVGYRAQVQG TTLILNVGYS NPVQIEPPEG
IQFVVENNTN VVVSGISKEV VGNTAARIRA VRPPEPYKGK GIRYAGEVVL RKAGKTGKK
