RL6_THEMA
ID RL6_THEMA Reviewed; 184 AA.
AC Q9ZAE4;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 30-MAY-2000, sequence version 2.
DT 25-MAY-2022, entry version 122.
DE RecName: Full=50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365};
GN Name=rplF {ECO:0000255|HAMAP-Rule:MF_01365}; OrderedLocusNames=TM_1485;
OS Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826
OS / MSB8).
OC Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.
OX NCBI_TaxID=243274;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8;
RX PubMed=8002596; DOI=10.1128/jb.176.24.7703-7710.1994;
RA Sanangelantoni A.M., Bocchetta M., Cammarano P., Tiboni O.;
RT "Phylogenetic depth of S10 and spc operons: cloning and sequencing of a
RT ribosomal protein gene cluster from the extremely thermophilic bacterium
RT Thermotoga maritima.";
RL J. Bacteriol. 176:7703-7710(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8;
RX PubMed=10360571; DOI=10.1038/20601;
RA Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H.,
RA Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., McDonald L.A.,
RA Utterback T.R., Malek J.A., Linher K.D., Garrett M.M., Stewart A.M.,
RA Cotton M.D., Pratt M.S., Phillips C.A., Richardson D.L., Heidelberg J.F.,
RA Sutton G.G., Fleischmann R.D., Eisen J.A., White O., Salzberg S.L.,
RA Smith H.O., Venter J.C., Fraser C.M.;
RT "Evidence for lateral gene transfer between Archaea and Bacteria from
RT genome sequence of Thermotoga maritima.";
RL Nature 399:323-329(1999).
CC -!- FUNCTION: This protein binds to the 23S rRNA, and is important in its
CC secondary structure. It is located near the subunit interface in the
CC base of the L7/L12 stalk, and near the tRNA binding site of the
CC peptidyltransferase center. {ECO:0000255|HAMAP-Rule:MF_01365}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01365}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC {ECO:0000255|HAMAP-Rule:MF_01365}.
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DR EMBL; Z21677; CAA79792.1; -; Genomic_DNA.
DR EMBL; AE000512; AAD36551.1; -; Genomic_DNA.
DR PIR; E72248; E72248.
DR RefSeq; NP_229285.1; NC_000853.1.
DR RefSeq; WP_004081804.1; NZ_CP011107.1.
DR AlphaFoldDB; Q9ZAE4; -.
DR SMR; Q9ZAE4; -.
DR STRING; 243274.THEMA_06875; -.
DR EnsemblBacteria; AAD36551; AAD36551; TM_1485.
DR KEGG; tma:TM1485; -.
DR eggNOG; COG0097; Bacteria.
DR InParanoid; Q9ZAE4; -.
DR OMA; KPDPYKG; -.
DR OrthoDB; 1398618at2; -.
DR Proteomes; UP000008183; Chromosome.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR Gene3D; 3.90.930.12; -; 2.
DR HAMAP; MF_01365_B; Ribosomal_L6_B; 1.
DR InterPro; IPR000702; Ribosomal_L6.
DR InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR InterPro; IPR019906; Ribosomal_L6_bac-type.
DR PANTHER; PTHR11655; PTHR11655; 1.
DR PANTHER; PTHR11655:SF14; PTHR11655:SF14; 1.
DR Pfam; PF00347; Ribosomal_L6; 2.
DR PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR PRINTS; PR00059; RIBOSOMALL6.
DR SUPFAM; SSF56053; SSF56053; 2.
DR TIGRFAMs; TIGR03654; L6_bact; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..184
FT /note="50S ribosomal protein L6"
FT /id="PRO_0000131071"
FT CONFLICT 50
FT /note="V -> G (in Ref. 1; CAA79792)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 184 AA; 20786 MW; C4BCA1ED9F4CF865 CRC64;
MSRLAKKPIV LPQGVTVEIK DNVVKVKGPK GELSQEFLPY VKIEVEGNEV WVRPNEEQII
RKSDWRKVKM FQGTYWSLIR NMVVGVTEGY KKELEIVGIG YRAQLQGNTL VMNLGYAHPV
VYEIPSDVKI EVPAPNRIIV SGIDKQRVGQ VAAEIRAFRP PNVYTGKGIR YVGEVVRQKE
GKKA