RL73_ARATH
ID RL73_ARATH Reviewed; 242 AA.
AC P60039; O80581; Q42208; Q8GUM7; Q940T2;
DT 21-NOV-2003, integrated into UniProtKB/Swiss-Prot.
DT 21-NOV-2003, sequence version 1.
DT 25-MAY-2022, entry version 121.
DE RecName: Full=60S ribosomal protein L7-3;
GN Name=RPL7C; OrderedLocusNames=At2g44120; ORFNames=F6E13.25;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=P60039-1; Sequence=Displayed;
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL30 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC23430.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC004005; AAC23430.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002685; AEC10378.1; -; Genomic_DNA.
DR EMBL; AY052724; AAK96628.1; -; mRNA.
DR EMBL; AF446884; AAL38617.1; -; mRNA.
DR EMBL; AY065196; AAL38372.1; -; mRNA.
DR EMBL; AY081474; AAM10036.1; -; mRNA.
DR EMBL; BT002379; AAO00739.1; -; mRNA.
DR EMBL; AY087583; AAM65125.1; -; mRNA.
DR PIR; T00692; T00692.
DR RefSeq; NP_850410.1; NM_180079.4. [P60039-1]
DR RefSeq; NP_850411.1; NM_180080.2.
DR AlphaFoldDB; P60039; -.
DR SMR; P60039; -.
DR BioGRID; 4354; 168.
DR STRING; 3702.AT2G44120.2; -.
DR PaxDb; P60039; -.
DR PRIDE; P60039; -.
DR EnsemblPlants; AT2G44120.1; AT2G44120.1; AT2G44120. [P60039-1]
DR GeneID; 819018; -.
DR Gramene; AT2G44120.1; AT2G44120.1; AT2G44120. [P60039-1]
DR KEGG; ath:AT2G44120; -.
DR Araport; AT2G44120; -.
DR eggNOG; KOG3184; Eukaryota.
DR HOGENOM; CLU_055156_0_2_1; -.
DR InParanoid; P60039; -.
DR OrthoDB; 1544778at2759; -.
DR PhylomeDB; P60039; -.
DR PRO; PR:P60039; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; P60039; baseline and differential.
DR Genevisible; P60039; AT.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR CDD; cd01657; Ribosomal_L7_archeal_euk; 1.
DR Gene3D; 3.30.1390.20; -; 1.
DR InterPro; IPR036919; L30_ferredoxin-like_sf.
DR InterPro; IPR018038; Ribosomal_L30_CS.
DR InterPro; IPR016082; Ribosomal_L30_ferredoxin-like.
DR InterPro; IPR012988; Ribosomal_L30_N.
DR InterPro; IPR039699; Ribosomal_L7/L30.
DR InterPro; IPR005998; Ribosomal_L7_euk.
DR InterPro; IPR035808; Ribosomal_L7_euk_arc.
DR PANTHER; PTHR11524; PTHR11524; 1.
DR Pfam; PF00327; Ribosomal_L30; 1.
DR Pfam; PF08079; Ribosomal_L30_N; 1.
DR SUPFAM; SSF55129; SSF55129; 1.
DR TIGRFAMs; TIGR01310; uL30_euk; 1.
DR PROSITE; PS00634; RIBOSOMAL_L30; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein.
FT CHAIN 1..242
FT /note="60S ribosomal protein L7-3"
FT /id="PRO_0000104640"
SQ SEQUENCE 242 AA; 27940 MW; 205A0960E50D270E CRC64;
MAESKVVVPE SVLKKIKRQE EWALAKKDEA VAAKKKSVEA RKLIFKRAEQ YAKEYAEKDN
ELIRLKREAK LKGGFYVDPE AKLLFIIRIR GINAIDPKTK KILQLLRLRQ IFNGVFLKVN
KATVNMLRRV EPYVTYGYPN LKSVKELIYK RGYGKLNHQR IALTDNSIVD QALGKHGIIC
VEDLIHEIMT VGPHFKEANN FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELVRR
MN
