RL7A_CAEEL
ID RL7A_CAEEL Reviewed; 265 AA.
AC Q966C6; Q8T875;
DT 25-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 139.
DE RecName: Full=60S ribosomal protein L7a;
GN Name=rpl-7A {ECO:0000312|WormBase:Y24D9A.4a};
GN ORFNames=Y24D9A.4 {ECO:0000312|WormBase:Y24D9A.4a};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2] {ECO:0000305}
RP PROTEIN SEQUENCE OF 39-49; 86-94; 103-111; 178-186; 189-196; 198-213 AND
RP 219-230, AND IDENTIFICATION BY MASS SPECTROMETRY.
RA Bienvenut W.V.;
RL Submitted (SEP-2005) to UniProtKB.
RN [3]
RP INTERACTION WITH CMD-1.
RX PubMed=17854888; DOI=10.1016/j.ceca.2007.07.008;
RA Shen X., Valencia C.A., Gao W., Cotten S.W., Dong B., Huang B.C., Liu R.;
RT "Ca(2+)/Calmodulin-binding proteins from the C. elegans proteome.";
RL Cell Calcium 43:444-456(2008).
CC -!- SUBUNIT: Interacts with cmd-1 in the presence of Ca(2+).
CC {ECO:0000269|PubMed:17854888}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=a {ECO:0000312|WormBase:Y24D9A.4a};
CC IsoId=Q966C6-1; Sequence=Displayed;
CC Name=c {ECO:0000312|WormBase:Y24D9A.4c};
CC IsoId=Q966C6-2; Sequence=VSP_051845;
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL8 family.
CC {ECO:0000255}.
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DR EMBL; BX284604; CCD71898.1; -; Genomic_DNA.
DR EMBL; BX284604; CCD71899.1; -; Genomic_DNA.
DR RefSeq; NP_741371.2; NM_171316.6. [Q966C6-1]
DR RefSeq; NP_741372.2; NM_171904.4.
DR AlphaFoldDB; Q966C6; -.
DR SMR; Q966C6; -.
DR BioGRID; 42335; 91.
DR DIP; DIP-25472N; -.
DR STRING; 6239.Y24D9A.4a; -.
DR EPD; Q966C6; -.
DR PaxDb; Q966C6; -.
DR PeptideAtlas; Q966C6; -.
DR EnsemblMetazoa; Y24D9A.4.1; Y24D9A.4.1; WBGene00004419. [Q966C6-1]
DR GeneID; 177203; -.
DR KEGG; cel:CELE_Y24D9A.4; -.
DR UCSC; Y24D9A.4a; c. elegans. [Q966C6-1]
DR CTD; 177203; -.
DR WormBase; Y24D9A.4a; CE27398; WBGene00004419; rpl-7A. [Q966C6-1]
DR WormBase; Y24D9A.4c; CE30401; WBGene00004419; rpl-7A. [Q966C6-2]
DR eggNOG; KOG3166; Eukaryota.
DR GeneTree; ENSGT00940000170054; -.
DR InParanoid; Q966C6; -.
DR OMA; WLPALCK; -.
DR OrthoDB; 1200503at2759; -.
DR PhylomeDB; Q966C6; -.
DR Reactome; R-CEL-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-CEL-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR Reactome; R-CEL-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR Reactome; R-CEL-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-CEL-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR Reactome; R-CEL-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-CEL-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:Q966C6; -.
DR Proteomes; UP000001940; Chromosome IV.
DR Bgee; WBGene00004419; Expressed in larva and 3 other tissues.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005516; F:calmodulin binding; IPI:WormBase.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0000470; P:maturation of LSU-rRNA; IBA:GO_Central.
DR Gene3D; 3.30.1330.30; -; 1.
DR InterPro; IPR029064; L30e-like.
DR InterPro; IPR001921; Ribosomal_L7A/L8.
DR InterPro; IPR004038; Ribosomal_L7Ae/L30e/S12e/Gad45.
DR InterPro; IPR018492; Ribosomal_L7Ae/L8/Nhp2.
DR InterPro; IPR004037; Ribosomal_L7Ae_CS.
DR Pfam; PF01248; Ribosomal_L7Ae; 1.
DR PRINTS; PR00881; L7ARS6FAMILY.
DR PRINTS; PR00882; RIBOSOMALL7A.
DR SUPFAM; SSF55315; SSF55315; 1.
DR PROSITE; PS01082; RIBOSOMAL_L7AE; 1.
PE 1: Evidence at protein level;
KW Alternative splicing; Calmodulin-binding; Direct protein sequencing;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250"
FT CHAIN 2..265
FT /note="60S ribosomal protein L7a"
FT /id="PRO_0000136756"
FT VAR_SEQ 109..128
FT /note="Missing (in isoform c)"
FT /evidence="ECO:0000305"
FT /id="VSP_051845"
SQ SEQUENCE 265 AA; 30174 MW; AC44C4420295D932 CRC64;
MPSKKVIKKK VAAVPAHIRA QTQVQKEVKN PLFEKRARNF NIGQDIQPKK DVTRFVKWPK
YIRLQRQSAI LQKRLKVPPT INQFRTALDS QSARQAFKLL DKYRPESTEA KKNRLRARAE
ARAAGKKEEV TKRPNTVRHG VNTITRLVET RRAQLVLIAH DVNPLEIVLH LPALCRKYNV
PYAIIKGKAS LGTVVRRKTT AAVALVDVNP EDKSALNKLV ETVNNNFSER HEEIRKHWGG
GVMSAKSDAK KLKIERARAR DLGKL