RL9_MYCS2
ID RL9_MYCS2 Reviewed; 151 AA.
AC A0R7F6; I7GG97;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2007, sequence version 1.
DT 25-MAY-2022, entry version 89.
DE RecName: Full=50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503};
GN Name=rplI {ECO:0000255|HAMAP-Rule:MF_00503};
GN OrderedLocusNames=MSMEG_6894, MSMEI_6710;
OS Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS smegmatis).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycolicibacterium.
OX NCBI_TaxID=246196;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RA Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C.,
RA Fraser C.M.;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=17295914; DOI=10.1186/gb-2007-8-2-r20;
RA Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C.,
RA Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.;
RT "Interrupted coding sequences in Mycobacterium smegmatis: authentic
RT mutations or sequencing errors?";
RL Genome Biol. 8:R20.1-R20.9(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND IDENTIFICATION BY MASS
RP SPECTROMETRY [LARGE SCALE ANALYSIS].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=18955433; DOI=10.1101/gr.081901.108;
RA Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M.,
RA Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.;
RT "Ortho-proteogenomics: multiple proteomes investigation through orthology
RT and a new MS-based protocol.";
RL Genome Res. 19:128-135(2009).
CC -!- FUNCTION: Binds to the 23S rRNA. {ECO:0000255|HAMAP-Rule:MF_00503}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL9 family.
CC {ECO:0000255|HAMAP-Rule:MF_00503}.
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DR EMBL; CP000480; ABK76149.1; -; Genomic_DNA.
DR EMBL; CP001663; AFP43136.1; -; Genomic_DNA.
DR RefSeq; WP_003898318.1; NZ_SIJM01000001.1.
DR RefSeq; YP_891094.1; NC_008596.1.
DR PDB; 5O60; EM; 3.20 A; H=1-151.
DR PDB; 5O61; EM; 3.31 A; H=1-151.
DR PDB; 5XYM; EM; 3.08 A; H=1-151.
DR PDB; 5ZEB; EM; 3.40 A; H=1-151.
DR PDB; 5ZEP; EM; 3.40 A; H=1-151.
DR PDB; 5ZET; EM; 3.20 A; H=1-151.
DR PDB; 6DZI; EM; 3.46 A; H=1-151.
DR PDB; 6DZP; EM; 3.42 A; H=1-151.
DR PDBsum; 5O60; -.
DR PDBsum; 5O61; -.
DR PDBsum; 5XYM; -.
DR PDBsum; 5ZEB; -.
DR PDBsum; 5ZEP; -.
DR PDBsum; 5ZET; -.
DR PDBsum; 6DZI; -.
DR PDBsum; 6DZP; -.
DR AlphaFoldDB; A0R7F6; -.
DR SMR; A0R7F6; -.
DR IntAct; A0R7F6; 3.
DR STRING; 246196.MSMEI_6710; -.
DR PRIDE; A0R7F6; -.
DR EnsemblBacteria; ABK76149; ABK76149; MSMEG_6894.
DR EnsemblBacteria; AFP43136; AFP43136; MSMEI_6710.
DR GeneID; 66738148; -.
DR KEGG; msg:MSMEI_6710; -.
DR KEGG; msm:MSMEG_6894; -.
DR PATRIC; fig|246196.19.peg.6715; -.
DR eggNOG; COG0359; Bacteria.
DR OMA; MKIILTH; -.
DR OrthoDB; 1959318at2; -.
DR Proteomes; UP000000757; Chromosome.
DR Proteomes; UP000006158; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.10.430.100; -; 1.
DR Gene3D; 3.40.5.10; -; 1.
DR HAMAP; MF_00503; Ribosomal_L9; 1.
DR InterPro; IPR000244; Ribosomal_L9.
DR InterPro; IPR009027; Ribosomal_L9/RNase_H1_N.
DR InterPro; IPR020594; Ribosomal_L9_bac/chp.
DR InterPro; IPR020069; Ribosomal_L9_C.
DR InterPro; IPR036791; Ribosomal_L9_C_sf.
DR InterPro; IPR020070; Ribosomal_L9_N.
DR InterPro; IPR036935; Ribosomal_L9_N_sf.
DR PANTHER; PTHR21368; PTHR21368; 1.
DR Pfam; PF03948; Ribosomal_L9_C; 1.
DR Pfam; PF01281; Ribosomal_L9_N; 1.
DR SUPFAM; SSF55653; SSF55653; 1.
DR SUPFAM; SSF55658; SSF55658; 1.
DR TIGRFAMs; TIGR00158; L9; 1.
DR PROSITE; PS00651; RIBOSOMAL_L9; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..151
FT /note="50S ribosomal protein L9"
FT /id="PRO_1000014811"
FT STRAND 4..7
FT /evidence="ECO:0007829|PDB:5XYM"
FT TURN 10..12
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 18..20
FT /evidence="ECO:0007829|PDB:5ZET"
FT HELIX 23..28
FT /evidence="ECO:0007829|PDB:5XYM"
FT HELIX 30..33
FT /evidence="ECO:0007829|PDB:5XYM"
FT STRAND 35..37
FT /evidence="ECO:0007829|PDB:5XYM"
FT HELIX 42..57
FT /evidence="ECO:0007829|PDB:5ZET"
FT HELIX 63..72
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 73..75
FT /evidence="ECO:0007829|PDB:5O60"
FT STRAND 78..81
FT /evidence="ECO:0007829|PDB:5ZET"
FT TURN 86..88
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 90..93
FT /evidence="ECO:0007829|PDB:5ZET"
FT HELIX 98..106
FT /evidence="ECO:0007829|PDB:5ZET"
FT HELIX 114..116
FT /evidence="ECO:0007829|PDB:5ZET"
FT TURN 120..122
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 125..134
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 137..139
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 143..149
FT /evidence="ECO:0007829|PDB:5ZET"
SQ SEQUENCE 151 AA; 15923 MW; CA4F4ABB3E45F66B CRC64;
MKLILTAEVE HLGAAGDTVE VKDGYGRNYL LPRGLAIVAS RGAERQAEEI RRARESKVIR
DIEHANELKT ALEGLGDVTL SVNAAGDTGK LFGSVTAADV VNAIKKAGGP NLDKRTVQLA
KAHIKSVGTH PVTVKLHTGV EAKVSLNVVA Q
