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RL9_RAT
ID   RL9_RAT                 Reviewed;         192 AA.
AC   P17077;
DT   01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT   01-AUG-1990, sequence version 1.
DT   03-AUG-2022, entry version 148.
DE   RecName: Full=60S ribosomal protein L9;
GN   Name=Rpl9;
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Rattus.
OX   NCBI_TaxID=10116;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], AND PROTEIN SEQUENCE OF 1-45.
RC   STRAIN=Sprague-Dawley; TISSUE=Liver;
RX   PubMed=2227441; DOI=10.1016/0378-1119(90)90239-n;
RA   Suzuki K., Olvera J., Wool I.G.;
RT   "The primary structure of rat ribosomal protein L9.";
RL   Gene 93:297-300(1990).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Ovary;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
CC   -!- FUNCTION: Component of the large ribosomal subunit. The ribosome is a
CC       large ribonucleoprotein complex responsible for the synthesis of
CC       proteins in the cell. {ECO:0000250|UniProtKB:P32969}.
CC   -!- SUBUNIT: Component of the large ribosomal subunit.
CC       {ECO:0000250|UniProtKB:P32969}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P32969}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC       {ECO:0000305}.
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DR   EMBL; X51706; CAA36002.1; -; mRNA.
DR   EMBL; BC086561; AAH86561.1; -; mRNA.
DR   PIR; JH0222; R5RT9.
DR   RefSeq; NP_001007599.3; NM_001007598.3.
DR   RefSeq; XP_002725578.1; XM_002725532.5.
DR   RefSeq; XP_002729193.1; XM_002729147.2.
DR   RefSeq; XP_003748822.1; XM_003748774.4.
DR   RefSeq; XP_003753735.1; XM_003753687.1.
DR   AlphaFoldDB; P17077; -.
DR   SMR; P17077; -.
DR   BioGRID; 247930; 2.
DR   IntAct; P17077; 3.
DR   STRING; 10116.ENSRNOP00000041817; -.
DR   iPTMnet; P17077; -.
DR   PhosphoSitePlus; P17077; -.
DR   jPOST; P17077; -.
DR   PaxDb; P17077; -.
DR   PRIDE; P17077; -.
DR   Ensembl; ENSRNOT00000038927; ENSRNOP00000032635; ENSRNOG00000026716.
DR   Ensembl; ENSRNOT00000042201; ENSRNOP00000041817; ENSRNOG00000030476.
DR   Ensembl; ENSRNOT00000052231; ENSRNOP00000069650; ENSRNOG00000028449.
DR   GeneID; 100360449; -.
DR   GeneID; 100364457; -.
DR   GeneID; 29257; -.
DR   KEGG; rno:100360449; -.
DR   KEGG; rno:100364457; -.
DR   KEGG; rno:29257; -.
DR   UCSC; RGD:62049; rat.
DR   CTD; 6133; -.
DR   RGD; 62049; Rpl9.
DR   eggNOG; KOG3255; Eukaryota.
DR   GeneTree; ENSGT00390000015224; -.
DR   HOGENOM; CLU_065464_0_2_1; -.
DR   InParanoid; P17077; -.
DR   OMA; VFQDGIY; -.
DR   OrthoDB; 1408258at2759; -.
DR   PhylomeDB; P17077; -.
DR   TreeFam; TF300033; -.
DR   Reactome; R-RNO-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR   Reactome; R-RNO-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR   Reactome; R-RNO-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR   Reactome; R-RNO-72689; Formation of a pool of free 40S subunits.
DR   Reactome; R-RNO-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR   Reactome; R-RNO-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR   Reactome; R-RNO-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR   PRO; PR:P17077; -.
DR   Proteomes; UP000002494; Chromosome 1.
DR   Proteomes; UP000002494; Chromosome 14.
DR   Proteomes; UP000002494; Chromosome 3.
DR   Bgee; ENSRNOG00000026716; Expressed in ovary and 19 other tissues.
DR   Genevisible; P17077; RN.
DR   GO; GO:0022625; C:cytosolic large ribosomal subunit; IDA:RGD.
DR   GO; GO:0022626; C:cytosolic ribosome; ISO:RGD.
DR   GO; GO:0045202; C:synapse; ISO:RGD.
DR   GO; GO:0019843; F:rRNA binding; IEA:InterPro.
DR   GO; GO:0003735; F:structural constituent of ribosome; ISO:RGD.
DR   GO; GO:1990090; P:cellular response to nerve growth factor stimulus; IEP:RGD.
DR   GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR   Gene3D; 3.90.930.12; -; 2.
DR   InterPro; IPR000702; Ribosomal_L6.
DR   InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR   InterPro; IPR036789; Ribosomal_L6_a/b-dom_sf.
DR   InterPro; IPR002359; Ribosomal_L6_CS2.
DR   PANTHER; PTHR11655; PTHR11655; 1.
DR   Pfam; PF00347; Ribosomal_L6; 2.
DR   PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR   SUPFAM; SSF56053; SSF56053; 2.
DR   PROSITE; PS00700; RIBOSOMAL_L6_2; 1.
PE   1: Evidence at protein level;
KW   Acetylation; Cytoplasm; Direct protein sequencing; Reference proteome;
KW   Ribonucleoprotein; Ribosomal protein.
FT   CHAIN           1..192
FT                   /note="60S ribosomal protein L9"
FT                   /id="PRO_0000131100"
FT   MOD_RES         121
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000250|UniProtKB:P32969"
SQ   SEQUENCE   192 AA;  21893 MW;  024F3ABA12F77D30 CRC64;
     MKTILSNQTV DIPENVDITL KGRTVIVKGP RGTLRRDFNH INVELSLLGK KKKRLRVDKW
     WGNRKELATV RTICSHVQNM IKGVTLGFRY KMRSVYAHFP INVVIQENGS LVEIRNFLGE
     KYIRRVRMRT GVACSVSQAQ KDELILEGND IELVSNSAAL IQQATTVKNK DIRKFLDGIY
     VSEKGTVQQP DE
 
 
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