RLA13_ARATH
ID RLA13_ARATH Reviewed; 113 AA.
AC Q8LEQ0; Q9FIK9;
DT 11-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2006, sequence version 2.
DT 25-MAY-2022, entry version 117.
DE RecName: Full=60S acidic ribosomal protein P1-3;
GN Name=RPP1C; OrderedLocusNames=At5g47700; ORFNames=MCA23.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10048488; DOI=10.1093/dnares/5.6.379;
RA Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence
RT features of the regions of 1,081,958 bp covered by seventeen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:379-391(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- FUNCTION: Plays an important role in the elongation step of protein
CC synthesis. {ECO:0000250}.
CC -!- SUBUNIT: P1 and P2 exist as dimers at the large ribosomal subunit.
CC {ECO:0000250}.
CC -!- INTERACTION:
CC Q8LEQ0; O04204: RPP0A; NbExp=2; IntAct=EBI-4454990, EBI-4454995;
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein P1/P2 family.
CC {ECO:0000305}.
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DR EMBL; AB016886; BAB11317.1; -; Genomic_DNA.
DR EMBL; CP002688; AED95554.1; -; Genomic_DNA.
DR EMBL; CP002688; AED95555.1; -; Genomic_DNA.
DR EMBL; AY070049; AAL49806.1; -; mRNA.
DR EMBL; AY096430; AAM20070.1; -; mRNA.
DR EMBL; AY085303; AAM62534.1; -; mRNA.
DR RefSeq; NP_001078728.1; NM_001085259.1.
DR RefSeq; NP_199581.1; NM_124144.4.
DR AlphaFoldDB; Q8LEQ0; -.
DR SMR; Q8LEQ0; -.
DR BioGRID; 20069; 6.
DR IntAct; Q8LEQ0; 1.
DR STRING; 3702.AT5G47700.1; -.
DR iPTMnet; Q8LEQ0; -.
DR PaxDb; Q8LEQ0; -.
DR PRIDE; Q8LEQ0; -.
DR ProteomicsDB; 228020; -.
DR EnsemblPlants; AT5G47700.1; AT5G47700.1; AT5G47700.
DR EnsemblPlants; AT5G47700.2; AT5G47700.2; AT5G47700.
DR GeneID; 834821; -.
DR Gramene; AT5G47700.1; AT5G47700.1; AT5G47700.
DR Gramene; AT5G47700.2; AT5G47700.2; AT5G47700.
DR KEGG; ath:AT5G47700; -.
DR Araport; AT5G47700; -.
DR TAIR; locus:2160862; AT5G47700.
DR eggNOG; KOG1762; Eukaryota.
DR HOGENOM; CLU_114656_1_2_1; -.
DR InParanoid; Q8LEQ0; -.
DR OMA; TDVEPIW; -.
DR OrthoDB; 1633925at2759; -.
DR PhylomeDB; Q8LEQ0; -.
DR PRO; PR:Q8LEQ0; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q8LEQ0; baseline and differential.
DR Genevisible; Q8LEQ0; AT.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0022626; C:cytosolic ribosome; HDA:TAIR.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR GO; GO:0030295; F:protein kinase activator activity; IBA:GO_Central.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA.
DR GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR GO; GO:0006414; P:translational elongation; IEA:InterPro.
DR Gene3D; 1.10.10.1410; -; 1.
DR HAMAP; MF_01478; Ribosomal_L12_arch; 1.
DR InterPro; IPR038716; P1/P2_N_sf.
DR InterPro; IPR027534; Ribosomal_L12/P1/P2.
PE 1: Evidence at protein level;
KW Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..113
FT /note="60S acidic ribosomal protein P1-3"
FT /id="PRO_0000245782"
FT REGION 86..113
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 103
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:O23095"
SQ SEQUENCE 113 AA; 11247 MW; FAB300CD9B5D3FB6 CRC64;
MSTVGELACS YAVMILEDEG IAITADKIAT LVKAAGVTIE SYWPMLFAKM AEKRNVTDLI
MNVGAGGGGG APVAAAAPAA GGGAAAAAPA AEEKKKDEPA EESDGDLGFG LFD
