RLF24_ARATH
ID RLF24_ARATH Reviewed; 118 AA.
AC Q9LK37;
DT 28-NOV-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Protein RALF-like 24;
DE Flags: Precursor;
GN Name=RALFL24; OrderedLocusNames=At3g23805; ORFNames=MYM9.15;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2-18.
RC STRAIN=cv. Columbia;
RX PubMed=14993207; DOI=10.1101/gr.1515604;
RA Castelli V., Aury J.-M., Jaillon O., Wincker P., Clepet C., Menard M.,
RA Cruaud C., Quetier F., Scarpelli C., Schaechter V., Temple G., Caboche M.,
RA Weissenbach J., Salanoubat M.;
RT "Whole genome sequence comparisons and 'full-length' cDNA sequences: a
RT combined approach to evaluate and improve Arabidopsis genome annotation.";
RL Genome Res. 14:406-413(2004).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12611624;
RA Olsen A.N., Mundy J., Skriver K.;
RT "Peptomics, identification of novel cationic Arabidopsis peptides with
RT conserved sequence motifs.";
RL In Silico Biol. 2:441-451(2002).
CC -!- FUNCTION: Cell signaling peptide that may regulate plant stress,
CC growth, and development. Mediates a rapid alkalinization of
CC extracellular space by mediating a transient increase in the
CC cytoplasmic Ca(2+) concentration leading to a calcium-dependent
CC signaling events through a cell surface receptor and a concomitant
CC activation of some intracellular mitogen-activated protein kinases (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC -!- PTM: Proteolytically cleaved, probably by S1P, a subtilisin-like serine
CC protease (subtilase). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the plant rapid alkalinization factor (RALF)
CC family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BX825164; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AP000377; BAB01857.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76816.1; -; Genomic_DNA.
DR EMBL; BX825164; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; NP_566740.1; NM_113285.3.
DR AlphaFoldDB; Q9LK37; -.
DR SMR; Q9LK37; -.
DR STRING; 3702.AT3G23805.1; -.
DR PaxDb; Q9LK37; -.
DR PRIDE; Q9LK37; -.
DR ProteomicsDB; 228092; -.
DR EnsemblPlants; AT3G23805.1; AT3G23805.1; AT3G23805.
DR GeneID; 821963; -.
DR Gramene; AT3G23805.1; AT3G23805.1; AT3G23805.
DR KEGG; ath:AT3G23805; -.
DR Araport; AT3G23805; -.
DR TAIR; locus:505006366; AT3G23805.
DR eggNOG; ENOG502S4CN; Eukaryota.
DR HOGENOM; CLU_127895_0_0_1; -.
DR InParanoid; Q9LK37; -.
DR OMA; QANAYNR; -.
DR OrthoDB; 1601238at2759; -.
DR PhylomeDB; Q9LK37; -.
DR PRO; PR:Q9LK37; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LK37; baseline and differential.
DR Genevisible; Q9LK37; AT.
DR GO; GO:0048046; C:apoplast; ISS:TAIR.
DR GO; GO:0005179; F:hormone activity; ISS:UniProtKB.
DR GO; GO:0019722; P:calcium-mediated signaling; ISS:UniProtKB.
DR GO; GO:0007267; P:cell-cell signaling; ISS:TAIR.
DR InterPro; IPR008801; RALF.
DR Pfam; PF05498; RALF; 1.
PE 3: Inferred from homology;
KW Disulfide bond; Hormone; Reference proteome; Secreted; Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT PROPEP 23..63
FT /note="Removed in mature form"
FT /evidence="ECO:0000250"
FT /id="PRO_0000420320"
FT CHAIN 64..118
FT /note="Protein RALF-like 24"
FT /id="PRO_0000420321"
FT SITE 59..60
FT /note="Required for proteolytic cleavage"
FT /evidence="ECO:0000250"
FT DISULFID 81..91
FT /evidence="ECO:0000250"
FT DISULFID 103..109
FT /evidence="ECO:0000250"
SQ SEQUENCE 118 AA; 13243 MW; DA763CF0D8B809B2 CRC64;
MSRSLALVYL SLLCLQTHLS ISVTVPIPSV NGEIDAMLNR NGVIGEEEGE EMMPSEISRR
VMMMRKQYIS YETLRRDMVP CQKPGASYYA CRSGQANAYN RGCSVITRCA RDTNDIKT
