RLF9_ARATH
ID RLF9_ARATH Reviewed; 75 AA.
AC Q3ECL0; Q8LBS8;
DT 28-NOV-2012, integrated into UniProtKB/Swiss-Prot.
DT 08-NOV-2005, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Protein RALF-like 9;
DE Flags: Precursor;
GN Name=RALFL9; OrderedLocusNames=At1g61566; ORFNames=T25B24;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12611624;
RA Olsen A.N., Mundy J., Skriver K.;
RT "Peptomics, identification of novel cationic Arabidopsis peptides with
RT conserved sequence motifs.";
RL In Silico Biol. 2:441-451(2002).
CC -!- FUNCTION: Cell signaling peptide that may regulate plant stress,
CC growth, and development. Mediates a rapid alkalinization of
CC extracellular space by mediating a transient increase in the
CC cytoplasmic Ca(2+) concentration leading to a calcium-dependent
CC signaling events through a cell surface receptor and a concomitant
CC activation of some intracellular mitogen-activated protein kinases (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the plant rapid alkalinization factor (RALF)
CC family. {ECO:0000305}.
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DR EMBL; AC005850; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002684; AEE33856.1; -; Genomic_DNA.
DR EMBL; BT026021; ABG25110.1; -; mRNA.
DR EMBL; AY087014; AAM64575.1; -; mRNA.
DR RefSeq; NP_564779.1; NM_104838.2.
DR AlphaFoldDB; Q3ECL0; -.
DR SMR; Q3ECL0; -.
DR STRING; 3702.AT1G61566.1; -.
DR PaxDb; Q3ECL0; -.
DR PRIDE; Q3ECL0; -.
DR EnsemblPlants; AT1G61566.1; AT1G61566.1; AT1G61566.
DR GeneID; 842452; -.
DR Gramene; AT1G61566.1; AT1G61566.1; AT1G61566.
DR KEGG; ath:AT1G61566; -.
DR Araport; AT1G61566; -.
DR TAIR; locus:505006196; AT1G61566.
DR eggNOG; ENOG502SW1C; Eukaryota.
DR HOGENOM; CLU_184731_1_0_1; -.
DR OMA; CEILERC; -.
DR OrthoDB; 1645979at2759; -.
DR PhylomeDB; Q3ECL0; -.
DR PRO; PR:Q3ECL0; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q3ECL0; baseline and differential.
DR Genevisible; Q3ECL0; AT.
DR GO; GO:0048046; C:apoplast; ISS:TAIR.
DR GO; GO:0005179; F:hormone activity; ISS:UniProtKB.
DR GO; GO:0019722; P:calcium-mediated signaling; ISS:UniProtKB.
DR GO; GO:0007267; P:cell-cell signaling; ISS:TAIR.
DR InterPro; IPR008801; RALF.
DR Pfam; PF05498; RALF; 1.
PE 3: Inferred from homology;
KW Disulfide bond; Hormone; Reference proteome; Secreted; Signal.
FT SIGNAL 1..28
FT /evidence="ECO:0000255"
FT CHAIN 29..75
FT /note="Protein RALF-like 9"
FT /id="PRO_0000420300"
FT DISULFID 46..54
FT /evidence="ECO:0000250"
FT DISULFID 66..72
FT /evidence="ECO:0000250"
FT CONFLICT 23
FT /note="A -> G (in Ref. 4; AAM64575)"
FT /evidence="ECO:0000305"
FT CONFLICT 58
FT /note="E -> Q (in Ref. 4; AAM64575)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 75 AA; 8260 MW; 00CB8E2E6C7735CD CRC64;
MGMSKSIKVI LSLALVVFLA LAATKVEATR YITYPAIDRG DHAVHCDKAH PNTCKKKEAN
PYQRGCEKIN RCRGG