RLP39_ARATH
ID RLP39_ARATH Reviewed; 884 AA.
AC F4J7T6; Q9LRX1;
DT 25-APR-2018, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 1.
DT 25-MAY-2022, entry version 72.
DE RecName: Full=Receptor-like protein 39 {ECO:0000303|PubMed:18434605};
DE Short=AtRLP39 {ECO:0000303|PubMed:18434605};
DE Flags: Precursor;
GN Name=RLP39 {ECO:0000303|PubMed:18434605};
GN OrderedLocusNames=At3g24900 {ECO:0000312|Araport:AT3G24900};
GN ORFNames=K7P8.19 {ECO:0000312|EMBL:BAB02900.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15955925; DOI=10.1104/pp.104.054452;
RA Fritz-Laylin L.K., Krishnamurthy N., Toer M., Sjoelander K.V., Jones J.D.;
RT "Phylogenomic analysis of the receptor-like proteins of rice and
RT Arabidopsis.";
RL Plant Physiol. 138:611-623(2005).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=18434605; DOI=10.1104/pp.108.119487;
RA Wang G., Ellendorff U., Kemp B., Mansfield J.W., Forsyth A., Mitchell K.,
RA Bastas K., Liu C.-M., Woods-Toer A., Zipfel C., de Wit P.J.G.M.,
RA Jones J.D.G., Toer M., Thomma B.P.H.J.;
RT "A genome-wide functional investigation into the roles of receptor-like
RT proteins in Arabidopsis.";
RL Plant Physiol. 147:503-517(2008).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Single-pass type I
CC membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the RLP family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB02900.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB028609; BAB02900.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE76960.1; -; Genomic_DNA.
DR RefSeq; NP_189134.1; NM_113402.1.
DR AlphaFoldDB; F4J7T6; -.
DR SMR; F4J7T6; -.
DR STRING; 3702.AT3G24900.1; -.
DR PaxDb; F4J7T6; -.
DR ProteomicsDB; 228113; -.
DR EnsemblPlants; AT3G24900.1; AT3G24900.1; AT3G24900.
DR GeneID; 822088; -.
DR Gramene; AT3G24900.1; AT3G24900.1; AT3G24900.
DR KEGG; ath:AT3G24900; -.
DR Araport; AT3G24900; -.
DR TAIR; locus:2087253; AT3G24900.
DR HOGENOM; CLU_000288_18_3_1; -.
DR InParanoid; F4J7T6; -.
DR OMA; HVMASYK; -.
DR PRO; PR:F4J7T6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; F4J7T6; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR Gene3D; 3.80.10.10; -; 5.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR045273; RLP23-like.
DR PANTHER; PTHR27004; PTHR27004; 1.
DR Pfam; PF00560; LRR_1; 1.
DR Pfam; PF13516; LRR_6; 1.
DR SMART; SM00369; LRR_TYP; 9.
PE 3: Inferred from homology;
KW Cell membrane; Glycoprotein; Leucine-rich repeat; Membrane; Receptor;
KW Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..884
FT /note="Receptor-like protein 39"
FT /id="PRO_5003315430"
FT TOPO_DOM 25..847
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 848..868
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 869..884
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT REPEAT 98..122
FT /note="LRR 1"
FT /evidence="ECO:0000255"
FT REPEAT 124..146
FT /note="LRR 2"
FT /evidence="ECO:0000255"
FT REPEAT 147..170
FT /note="LRR 3"
FT /evidence="ECO:0000255"
FT REPEAT 171..196
FT /note="LRR 4"
FT /evidence="ECO:0000255"
FT REPEAT 197..223
FT /note="LRR 5"
FT /evidence="ECO:0000255"
FT REPEAT 225..245
FT /note="LRR 6"
FT /evidence="ECO:0000255"
FT REPEAT 246..268
FT /note="LRR 7"
FT /evidence="ECO:0000255"
FT REPEAT 269..292
FT /note="LRR 8"
FT /evidence="ECO:0000255"
FT REPEAT 294..318
FT /note="LRR 9"
FT /evidence="ECO:0000255"
FT REPEAT 320..344
FT /note="LRR 10"
FT /evidence="ECO:0000255"
FT REPEAT 345..365
FT /note="LRR 11; degenerate"
FT /evidence="ECO:0000305"
FT REPEAT 366..391
FT /note="LRR 12"
FT /evidence="ECO:0000255"
FT REPEAT 392..413
FT /note="LRR 13"
FT /evidence="ECO:0000255"
FT REPEAT 414..438
FT /note="LRR 14"
FT /evidence="ECO:0000255"
FT REPEAT 440..463
FT /note="LRR 15"
FT /evidence="ECO:0000255"
FT REPEAT 464..487
FT /note="LRR 16"
FT /evidence="ECO:0000255"
FT REPEAT 488..507
FT /note="LRR 17; degenerate"
FT /evidence="ECO:0000305"
FT REPEAT 508..529
FT /note="LRR 18"
FT /evidence="ECO:0000255"
FT REPEAT 530..553
FT /note="LRR 19"
FT /evidence="ECO:0000255"
FT REPEAT 554..577
FT /note="LRR 20"
FT /evidence="ECO:0000255"
FT REPEAT 579..601
FT /note="LRR 21"
FT /evidence="ECO:0000255"
FT REPEAT 602..625
FT /note="LRR 22"
FT /evidence="ECO:0000255"
FT REPEAT 628..652
FT /note="LRR 23"
FT /evidence="ECO:0000255"
FT REPEAT 702..725
FT /note="LRR 24"
FT /evidence="ECO:0000255"
FT REPEAT 726..749
FT /note="LRR 25"
FT /evidence="ECO:0000255"
FT REPEAT 750..773
FT /note="LRR 26"
FT /evidence="ECO:0000255"
FT REPEAT 775..798
FT /note="LRR 27"
FT /evidence="ECO:0000255"
FT CARBOHYD 59
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 71
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 92
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 146
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 190
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 208
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 244
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 267
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 304
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 313
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 353
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 403
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 463
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 520
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 576
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 732
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 780
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
SQ SEQUENCE 884 AA; 97449 MW; 91559E4ADD8F1685 CRC64;
MSELLFRLNF LLLLLLSCVS LASSFFSFND PVVGLGACGP HQIQAFTQFK NEFDTHACNH
SDSLNGVWCD NSTGAVMKLR LRACLSGTLK SNSSLFQFHQ LRHLYLSYNN FTPSSIPSEF
GMLNKLEVLF MSTGGFLGQV PSSFSNLSML SALLLHHNEL TGSLSFVRNL RKLTILDVSH
NHFSGTLNPN SSLFELHNLA YLDLGSNNFT SSSLPYEFGN LNKLELLDVS SNSFFGQVPP
TISNLTQLTE LYLPLNDFTG SLPLVQNLTK LSILHLSDNH FSGTIPSSLF TMPFLSYLDL
GGNNLSGSIE VPNSSLSSRL ENLNLGENHF EGKIIEPISK LINLKELHLS FLNTSYPINL
KLFSSLKYLL LLDLSGGWIS QASLSLDSYI PSTLEALLLK HCNISVFPNI LKTLPNLEFI
ALSTNKISGK IPEWLWSLPR LSSVFIEENL FTGFEGSSEI LVNSSVRILN LLSNNLEGAL
PHLPLSVNYF SARNNRYGGD IPLSICSRRS LVFLDLSYNN FTGPIPPCPS NFLILNLRKN
NLEGSIPDTY YADAPLRSLD VGYNRLTGKL PRSLLNCSAL QFLSVDHNGI KDTFPFSLKA
LPKLQVLILH SNNFYGPLSP PNQGSLGFPE LRILEIAGNK FTGSLPPDFF ENWKASSLTM
NEDQGLYMVY NKVVYGTYYF TSLEAIDLQY KGLSMEQNRV LSSSATIDFS GNRLEGEIPE
SIGLLKALIA LNLSNNAFTG HIPLSLANLK KIESLDLSSN QLSGTIPNGI GTLSFLAYMN
VSHNQLNGEI PQGTQITGQP KSSFEGNAGL CGLPLQESCF GTNAPPAQHP KEEEEEEEEE
EQVLNWKGVG IGYGVGVLLG LAIAQLIASY KPEWLVFLFQ SRNH
