RLP47_ARATH
ID RLP47_ARATH Reviewed; 800 AA.
AC Q9SVN2; F4JTT4;
DT 23-MAY-2018, integrated into UniProtKB/Swiss-Prot.
DT 23-MAY-2018, sequence version 2.
DT 03-AUG-2022, entry version 158.
DE RecName: Full=Receptor-like protein 47 {ECO:0000303|PubMed:18434605};
DE Short=AtRLP47 {ECO:0000303|PubMed:18434605};
DE Flags: Precursor;
GN Name=RLP47 {ECO:0000303|PubMed:18434605};
GN OrderedLocusNames=At4g13810 {ECO:0000312|Araport:AT4G13810};
GN ORFNames=F18A5.200 {ECO:0000312|EMBL:CAB36845.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15955925; DOI=10.1104/pp.104.054452;
RA Fritz-Laylin L.K., Krishnamurthy N., Toer M., Sjoelander K.V., Jones J.D.;
RT "Phylogenomic analysis of the receptor-like proteins of rice and
RT Arabidopsis.";
RL Plant Physiol. 138:611-623(2005).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=18434605; DOI=10.1104/pp.108.119487;
RA Wang G., Ellendorff U., Kemp B., Mansfield J.W., Forsyth A., Mitchell K.,
RA Bastas K., Liu C.-M., Woods-Toer A., Zipfel C., de Wit P.J.G.M.,
RA Jones J.D.G., Toer M., Thomma B.P.H.J.;
RT "A genome-wide functional investigation into the roles of receptor-like
RT proteins in Arabidopsis.";
RL Plant Physiol. 147:503-517(2008).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Single-pass type I
CC membrane protein {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q9SVN2-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q9SVN2-2; Sequence=VSP_059570;
CC -!- SIMILARITY: Belongs to the RLP family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB36845.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAB78423.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL035528; CAB36845.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161537; CAB78423.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE83328.1; -; Genomic_DNA.
DR PIR; T05250; T05250.
DR RefSeq; NP_001190722.1; NM_001203793.2. [Q9SVN2-2]
DR AlphaFoldDB; Q9SVN2; -.
DR SMR; Q9SVN2; -.
DR IntAct; Q9SVN2; 1.
DR STRING; 3702.AT4G13810.1; -.
DR PaxDb; Q9SVN2; -.
DR PRIDE; Q9SVN2; -.
DR ProteomicsDB; 228008; -. [Q9SVN2-1]
DR EnsemblPlants; AT4G13810.2; AT4G13810.2; AT4G13810. [Q9SVN2-2]
DR EnsemblPlants; AT4G13810.3; AT4G13810.3; AT4G13810.
DR GeneID; 827015; -.
DR Gramene; AT4G13810.2; AT4G13810.2; AT4G13810. [Q9SVN2-2]
DR Gramene; AT4G13810.3; AT4G13810.3; AT4G13810.
DR KEGG; ath:AT4G13810; -.
DR Araport; AT4G13810; -.
DR TAIR; locus:2119430; AT4G13810.
DR HOGENOM; CLU_000288_18_3_1; -.
DR InParanoid; Q9SVN2; -.
DR OMA; TIGHILY; -.
DR OrthoDB; 282372at2759; -.
DR PhylomeDB; Q9SVN2; -.
DR PRO; PR:Q9SVN2; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q9SVN2; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 3.80.10.10; -; 4.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR013210; LRR_N_plant-typ.
DR InterPro; IPR045273; RLP23-like.
DR PANTHER; PTHR27004; PTHR27004; 2.
DR Pfam; PF00560; LRR_1; 2.
DR Pfam; PF13516; LRR_6; 1.
DR Pfam; PF13855; LRR_8; 2.
DR Pfam; PF08263; LRRNT_2; 1.
DR SMART; SM00369; LRR_TYP; 6.
DR PROSITE; PS51450; LRR; 12.
PE 3: Inferred from homology;
KW Alternative splicing; Cell membrane; Glycoprotein; Leucine-rich repeat;
KW Membrane; Receptor; Reference proteome; Repeat; Signal; Transmembrane;
KW Transmembrane helix.
FT SIGNAL 1..31
FT /evidence="ECO:0000255"
FT CHAIN 32..800
FT /note="Receptor-like protein 47"
FT /id="PRO_0000444115"
FT TOPO_DOM 32..759
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 760..780
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 781..800
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT REPEAT 109..131
FT /note="LRR 1"
FT /evidence="ECO:0000255"
FT REPEAT 133..156
FT /note="LRR 2"
FT /evidence="ECO:0000255"
FT REPEAT 157..179
FT /note="LRR 3"
FT /evidence="ECO:0000255"
FT REPEAT 190..213
FT /note="LRR 4"
FT /evidence="ECO:0000255"
FT REPEAT 214..238
FT /note="LRR 5"
FT /evidence="ECO:0000255"
FT REPEAT 240..262
FT /note="LRR 6"
FT /evidence="ECO:0000255"
FT REPEAT 263..288
FT /note="LRR 7"
FT /evidence="ECO:0000255"
FT REPEAT 294..311
FT /note="LRR 8"
FT /evidence="ECO:0000255"
FT REPEAT 312..334
FT /note="LRR 9"
FT /evidence="ECO:0000255"
FT REPEAT 335..358
FT /note="LRR 10"
FT /evidence="ECO:0000255"
FT REPEAT 360..383
FT /note="LRR 11"
FT /evidence="ECO:0000255"
FT REPEAT 385..406
FT /note="LRR 12"
FT /evidence="ECO:0000255"
FT REPEAT 407..430
FT /note="LRR 13"
FT /evidence="ECO:0000255"
FT REPEAT 431..453
FT /note="LRR 14"
FT /evidence="ECO:0000255"
FT REPEAT 455..477
FT /note="LRR 15"
FT /evidence="ECO:0000255"
FT REPEAT 479..500
FT /note="LRR 16"
FT /evidence="ECO:0000255"
FT REPEAT 502..523
FT /note="LRR 17"
FT /evidence="ECO:0000255"
FT REPEAT 524..550
FT /note="LRR 18"
FT /evidence="ECO:0000255"
FT REPEAT 551..574
FT /note="LRR 19"
FT /evidence="ECO:0000255"
FT REPEAT 621..645
FT /note="LRR 20"
FT /evidence="ECO:0000255"
FT REPEAT 646..669
FT /note="LRR 21"
FT /evidence="ECO:0000255"
FT REPEAT 670..693
FT /note="LRR 22"
FT /evidence="ECO:0000255"
FT REPEAT 695..718
FT /note="LRR 23"
FT /evidence="ECO:0000255"
FT CARBOHYD 66
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 102
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 155
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 210
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 259
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 323
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 333
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 365
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 442
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 465
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 499
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 514
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 668
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 700
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT VAR_SEQ 205..298
FT /note="Missing (in isoform 2)"
FT /id="VSP_059570"
SQ SEQUENCE 800 AA; 89061 MW; 768AA6ACF032F937 CRC64;
MMHSSSVRRM ITVKWSLCLI FCLTNSILVS AKHLCLPDQK DSLWGFKNEF NVPSPHSYAM
TEKWRNNTDC CSWDGVSCDP KTGVVVELDL QYSHLNGPLR SNSSLFRLQH LQKLVLGSNH
LSGILPDSIG NLKRLKVLVL VNCNLFGKIP SSLGNLSYLT HLDLSYNDFT SEGPDSMGNL
NRLTDMLLKL SSVTWIDLGD NQLKGMLPSN MSSLSKLEAF DISGNSFSGT IPSSLFMIPS
LILLHLGRND FSGPFEIGNI SSPSNLQLLN IGRNNFNPDI VDLSIFSPLL SLGYLDVSGI
NLKISSTVSL PSPIEYLGLL SCNISEFPKF LRNQTSLEYL DISANQIEGQ VPEWLWSLPE
LRYVNISHNS FNGFEGPADV IQGGRELLVL DISSNIFQDP FPLLPVVSMN YLFSSNNRFS
GEIPKTICEL DNLRILVLSN NNFSGSIPRC FENLHLYVLH LRNNNLSGIF PEEAISHHLQ
SFDVGHNLFS GELPKSLINC SDIEFLNVED NRINDTFPSW LELLPNLQIL VLRSNEFYGP
IFSPGDSLSF SRLRIFDISE NRFTGVLPSD YFVGWSVMSS VVDIDGRIIQ YTVTGIDRDF
YHKSVALINK GLKMELVGSG FTIYKTIDVS GNRLEGDIPE SIGLLKEVIV LSMSNNAFTG
HIPPSLSNLS NLQSLDLSQN RLSGSIPGEL GKLTFLEWMN FSHNRLEGPI PETTQIQTQD
SSSFTENPGL CGAPLLKKCG GEEEATKQEQ DEDKEEEDQV FSWIAAAIGY VPGVVCGLTI
GHILVSHKRD WFMRIVSFFT
