RLP54_ARATH
ID RLP54_ARATH Reviewed; 792 AA.
AC F4KHA2; Q9FL15;
DT 23-MAY-2018, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Receptor-like protein 54 {ECO:0000303|PubMed:18434605};
DE Short=AtRLP54 {ECO:0000303|PubMed:18434605};
DE Flags: Precursor;
GN Name=RLP54 {ECO:0000303|PubMed:18434605};
GN OrderedLocusNames=At5g40170 {ECO:0000312|Araport:AT5G40170};
GN ORFNames=MSN9.7 {ECO:0000312|EMBL:BAB10898.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT features of the regions of 1,381,565 bp covered by twenty one physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:131-145(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15955925; DOI=10.1104/pp.104.054452;
RA Fritz-Laylin L.K., Krishnamurthy N., Toer M., Sjoelander K.V., Jones J.D.;
RT "Phylogenomic analysis of the receptor-like proteins of rice and
RT Arabidopsis.";
RL Plant Physiol. 138:611-623(2005).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=18434605; DOI=10.1104/pp.108.119487;
RA Wang G., Ellendorff U., Kemp B., Mansfield J.W., Forsyth A., Mitchell K.,
RA Bastas K., Liu C.-M., Woods-Toer A., Zipfel C., de Wit P.J.G.M.,
RA Jones J.D.G., Toer M., Thomma B.P.H.J.;
RT "A genome-wide functional investigation into the roles of receptor-like
RT proteins in Arabidopsis.";
RL Plant Physiol. 147:503-517(2008).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Single-pass type I
CC membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the RLP family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB10898.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB010699; BAB10898.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED94516.1; -; Genomic_DNA.
DR RefSeq; NP_198833.1; NM_123381.3.
DR AlphaFoldDB; F4KHA2; -.
DR SMR; F4KHA2; -.
DR STRING; 3702.AT5G40170.1; -.
DR PaxDb; F4KHA2; -.
DR PRIDE; F4KHA2; -.
DR ProteomicsDB; 228011; -.
DR EnsemblPlants; AT5G40170.1; AT5G40170.1; AT5G40170.
DR GeneID; 834015; -.
DR Gramene; AT5G40170.1; AT5G40170.1; AT5G40170.
DR KEGG; ath:AT5G40170; -.
DR Araport; AT5G40170; -.
DR TAIR; locus:2173777; AT5G40170.
DR eggNOG; KOG0619; Eukaryota.
DR HOGENOM; CLU_000288_18_3_1; -.
DR InParanoid; F4KHA2; -.
DR OMA; MDTRANI; -.
DR OrthoDB; 826997at2759; -.
DR PRO; PR:F4KHA2; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; F4KHA2; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR Gene3D; 3.80.10.10; -; 4.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR045273; RLP23-like.
DR PANTHER; PTHR27004; PTHR27004; 1.
DR Pfam; PF00560; LRR_1; 1.
DR Pfam; PF13516; LRR_6; 1.
DR Pfam; PF13855; LRR_8; 3.
DR SMART; SM00369; LRR_TYP; 9.
DR PROSITE; PS51450; LRR; 14.
PE 3: Inferred from homology;
KW Cell membrane; Glycoprotein; Leucine-rich repeat; Membrane; Receptor;
KW Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT CHAIN 22..792
FT /note="Receptor-like protein 54"
FT /id="PRO_5003309975"
FT TOPO_DOM 22..758
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 759..779
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 780..792
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT REPEAT 114..137
FT /note="LRR 1"
FT /evidence="ECO:0000255"
FT REPEAT 139..162
FT /note="LRR 2"
FT /evidence="ECO:0000255"
FT REPEAT 163..187
FT /note="LRR 3"
FT /evidence="ECO:0000255"
FT REPEAT 189..209
FT /note="LRR 4"
FT /evidence="ECO:0000255"
FT REPEAT 211..233
FT /note="LRR 5"
FT /evidence="ECO:0000255"
FT REPEAT 235..258
FT /note="LRR 6"
FT /evidence="ECO:0000255"
FT REPEAT 259..282
FT /note="LRR 7"
FT /evidence="ECO:0000255"
FT REPEAT 283..302
FT /note="LRR 8"
FT /evidence="ECO:0000255"
FT REPEAT 303..324
FT /note="LRR 9"
FT /evidence="ECO:0000255"
FT REPEAT 325..349
FT /note="LRR 10"
FT /evidence="ECO:0000255"
FT REPEAT 351..374
FT /note="LRR 11"
FT /evidence="ECO:0000255"
FT REPEAT 375..399
FT /note="LRR 12"
FT /evidence="ECO:0000255"
FT REPEAT 400..418
FT /note="LRR 13; degenerate"
FT /evidence="ECO:0000305"
FT REPEAT 419..443
FT /note="LRR 15"
FT /evidence="ECO:0000255"
FT REPEAT 444..470
FT /note="LRR 15"
FT /evidence="ECO:0000255"
FT REPEAT 472..489
FT /note="LRR 16"
FT /evidence="ECO:0000255"
FT REPEAT 490..515
FT /note="LRR 17"
FT /evidence="ECO:0000255"
FT REPEAT 516..536
FT /note="LRR 18; degenerate"
FT /evidence="ECO:0000305"
FT REPEAT 539..563
FT /note="LRR 19"
FT /evidence="ECO:0000255"
FT REPEAT 614..637
FT /note="LRR 20"
FT /evidence="ECO:0000255"
FT REPEAT 638..661
FT /note="LRR 21"
FT /evidence="ECO:0000255"
FT REPEAT 662..685
FT /note="LRR 22"
FT /evidence="ECO:0000255"
FT REPEAT 687..709
FT /note="LRR 23"
FT /evidence="ECO:0000255"
FT CARBOHYD 68
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 107
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 161
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 230
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 304
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 314
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 356
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 374
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 431
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 442
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 454
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 488
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 503
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 553
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 563
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 647
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 692
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
SQ SEQUENCE 792 AA; 88797 MW; 701DB01112E3991E CRC64;
MKSNLAVFFI TCFFCCVFVT SDSVYTLPFP FPRDQVEILL ELKNEFPSFN CDLTWKLDYF
GRMDTRANIS SWTKDSDSFS GVSFDSETGV VKELSLGRQC LTSLKANSSL FRFQHLRYLD
LSENHFDSSP IPSGFGRLTY LESLDLSKNG FIGEVPSSIS NLSRLTNLDL SYNKLTGGIP
NLHSLTLLEN IDLSYNKFSG AIPSYLFTMP FLVSLNLRQN HLSDPLENIN YSATSKLLIL
DMAYNLMSHR ILEPISKLAN LIQIDLSFQK TPYTFNFDFL LFKSLVRLDL SGNSVSVVGT
GSENLTHLDL SSCNITEFPM FIKDLQRLWW LDISNNRIKG KVPELLWTLP SMLHVNLSRN
SFDSLEGTPK IILNSSISEL DLSSNAFKGS FPIIPPYVNI MAASNNYFTG GIPLIFCKRY
RLSLLDLSNN NFSGTIPRCL TNVSLGLEAL KLSNNSLTGR LPDIEDRLVL LDVGHNQISG
KLPRSLVNCT TLKFLNVEGN HINDTFPFWL KALTRLEIIV LRSNRFHGPI SSPEVSLSFT
ALRIIDISRN SFNGSLPQNY FANWSAPLVN TPQGYRWPEY TGDEHSKYET PLWSYPSIHL
RIKGRSIELG KIPDTYTSID FSGNSFEGQI PESIGDLKSL IVLDLSNNSF TGRIPSSLAK
LKQLESLDLS QNRISGNIPQ ELRELTFLGY VNMSHNRLTG QIPQSTQVGG QPKSSFEGNI
NLCGLPLQES CLRGNGVPST PHTQEQELPK QEHALNWKAA AIGYGPGVLF GLAIGQAFAR
YKPVLFYKLF RL
